Protein
View in Explore- Genbank accession
- AUM58010.1 [GenBank]
- Protein name
- hypothetical protein
- RBP type
-
TSP
- Protein sequence
-
MDYHDHLSVMDFNELICENLLDVDYGSFKEYYELNEARYITFTVYRTTHNSFVFDLLICENFIIYHGEKYTIKQTAPKVEGDKVFIEVMAYHIMYEFQNHSVESNKLDDDSSETGKTPEYSLDEYLRYGFANQKTSVKMTYKIIGDFKRKIPIDELGNKNGLEYCKEAVDLFGCIIYPNDTEVCFYSPETFYQRSEKVIRYQYNTDTVSATVSTLELRTAIKVFGKKYTAEEKKNYNPIRTTDIKYSNGFIKEGTYRTATIGSKATINFDCKYGNETVRFTIKKGSQGGIYKLILDGKQIKQISCFAKSVQSETIDLIKNIDKGKHVLEMIFLGEDPKNRIDISSNKKAKPCMYVGTEKSTVLNLIADNSGRNQYKAIVDYVADSAKQFGIRYANTQTNEDIETQDKLLEFAKKQINDTPKTELDVNYIGYEKIEPRDSVFFVHELMGYNTELKVVKLDRSHPFVNAIDEVSFSNEIKDMVQIQQALNRRVIAQDNRYNYQANRINHLYTSTLNSPFETMDIGSVLI
- Physico‐chemical
properties -
protein length: 527 AA molecular weight: 60949,17830 Da isoelectric point: 5,73690 aromaticity: 0,11765 hydropathy: -0,52486
Domains
Domains [InterPro]
G3DSA:6.20.110.10
ATT
4–90
ATT
4–90
IPR044051
ENZ
18–92
ENZ
18–92
1
527
Architecture
ATT 4-90 | STR 91-377 | ENZ 378-486 | RBD 495-527
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
527
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 230 | 230 | 0,7631 |
| Central domain | 231 | 435 | 206 | 0,5005 |
| C-terminal | 436 | 527 | 91 | 0,0039 |
Note: Constraints were applied during segmentation.
Fixed 34 C-terminal predictions appearing before Central domain
Fixed 34 C-terminal predictions appearing before Central domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-230
1-230
Central
231-435
231-435
C-terminal
436-527
436-527
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Staphylococcus phage phiSa2wa_st72 [NCBI] |
2060953 | No lineage information |
| Host |
Staphylococcus aureus subsp. aureus RNSH95 genotype ST78-MRSA-IVa [NCBI] |
114188 | Streptophyta > Magnoliopsida > Asterales > Asteraceae > |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
AUM58010.1
[NCBI]
Genbank nucleotide accession
MG029513
[NCBI]
CDS location
range 36727 -> 38310
strand +
strand +
CDS
ATGGATTATCATGATCATTTATCAGTAATGGATTTTAATGAATTGATTTGTGAAAATTTACTAGATGTAGATTATGGTTCTTTTAAAGAATATTATGAACTGAATGAAGCTAGGTACATCACCTTTACAGTTTATAGAACTACTCATAATAGTTTTGTTTTTGATTTATTGATTTGTGAAAACTTCATAATTTATCATGGTGAAAAATATACAATTAAGCAGACAGCGCCAAAGGTTGAAGGTGATAAAGTTTTTATTGAAGTTATGGCATATCACATAATGTATGAATTTCAAAATCACTCAGTGGAATCAAATAAGCTTGATGACGACAGTAGCGAAACTGGTAAAACGCCAGAATACTCTTTAGATGAGTACTTAAGATATGGATTTGCAAATCAAAAAACGTCAGTCAAGATGACCTATAAAATAATTGGAGATTTTAAAAGAAAAATACCAATTGATGAATTAGGTAATAAAAATGGCTTAGAATATTGTAAAGAAGCAGTAGATTTGTTTGGTTGTATTATTTATCCAAATGATACGGAGGTATGTTTTTATTCTCCTGAAACATTTTATCAAAGAAGCGAGAAAGTGATTCGATATCAATATAATACTGATACTGTATCTGCAACTGTCAGTACATTGGAATTAAGAACAGCTATAAAAGTTTTTGGAAAAAAGTATACAGCTGAGGAAAAGAAAAATTATAATCCTATTAGAACAACTGACATTAAATATTCAAATGGTTTTATAAAAGAAGGTACTTATCGTACCGCAACAATTGGGTCTAAAGCTACTATTAACTTTGATTGCAAGTATGGTAATGAAACAGTTAGATTTACAATAAAAAAGGGCTCTCAAGGTGGAATATATAAGTTGATTTTAGACGGCAAGCAAATTAAGCAAATTTCTTGTTTTGCTAAGTCGGTTCAGTCTGAAACAATAGATTTAATAAAAAATATTGATAAAGGCAAGCACGTTTTAGAAATGATATTTTTAGGAGAAGACCCCAAAAATAGAATTGATATATCTTCAAATAAAAAAGCTAAGCCTTGTATGTATGTTGGAACTGAAAAATCAACAGTCTTAAATTTAATTGCTGACAACTCAGGTCGCAATCAATACAAAGCAATTGTTGACTACGTCGCAGATAGTGCAAAGCAGTTTGGGATTCGATATGCTAATACGCAAACAAATGAAGATATCGAAACACAGGATAAGCTGTTAGAATTTGCAAAAAAGCAAATAAATGATACTCCTAAGACTGAATTAGATGTTAATTATATAGGTTATGAAAAAATAGAGCCAAGAGATAGCGTATTCTTTGTTCATGAATTAATGGGATATAACACTGAATTAAAGGTTGTTAAACTTGATAGGTCACATCCATTTGTAAACGCAATAGATGAAGTGTCTTTCAGCAATGAAATAAAGGATATGGTACAAATTCAACAAGCGCTTAACAGACGAGTTATTGCACAAGATAATAGATATAACTATCAAGCAAATCGTATAAATCATTTATACACTAGTACTTTGAATTCTCCTTTCGAGACAATGGATATAGGGAGTGTATTAATATAA
Genome Context
Genome Context
Tertiary structure
PDB ID
68af6826a0b2dd68110d9f4c068365ff4071c84e469e2a1de5d84bcb72928770
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50