Protein

View in Explore
Genbank accession
AVX47647.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
Protein sequence
MAAQLEDLSMSYKQSAYPNLLMGVSQQVPFERLPGQLSEQINMVSDPVSGLRRRSGIELMAHLLHTDQPWPRPFLYHTNLGGRSIAMLVAQHRGELYLFDERDGRLLMGQPLVHDYLKATDYRQLRAATVADDLFIANLSVKPEADRTDIKGVDPNKAGWLYIKAGQYSKAFSMTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLYGKFFGAPEYTLPNSTKKYPKVNQDADAATIAGYLNQRGVQDGYIAFRGDADINVEVSTDMGNNYGIASGGMSLNATADLPALLPGVGAPGVGVQFMDGAVMATGSTKAPVYFEWDSANRRWAERAAYGTDWVLKKMPLALRWDEATDTYSLNELDYDRRGSGDEDTNPTFNFVTRGITGMTTFQGRLVLLSQEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQAVVPGGGIVTPRTAVISITTQYDLDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMPGPAEYIQAAASSGYLVFGTSTADEMICHQYLWQGNEKVQNAFHRWTLRHQIIGAYFTGDNLMVLIQKGQEIALGRMHLNSLPAREGLQYPKYDYWRRIEATVDGELELTKQHWDLIKDASAVYQLQPVAGAYMERTHLGVKRETNTKVFLDVPEAVVGAVYVVGCEFWSKVEFTPPVLRDHNGLPMTSTRAVLHRYNVNFGWTGEFLWRISDTARPNQPWYDTTPLRLFSRQLNAGEPLVDSAVVPLPARVDMATSKFELSCHSPYDMNVRAVEYNFKSNQIYRRV
Physico‐chemical
properties
protein length:835 AA
molecular weight: 92998,86660 Da
isoelectric point:5,89303
aromaticity:0,10659
hydropathy:-0,32036

Domains

Domains [InterPro]
DC_0058
STR
1–835
DC_0058
IPR058003
TTP
10–825
IPR058003
AVX47647.1
1 835
Architecture
STR
STR 1-835
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AVX47647.1
1 835
Domain Start End Length (AA) Confidence
N-terminal 1 148 148 0,9849
Central domain 149 347 200 0,2444
C-terminal 348 835 487 0,2948
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-148
Central
149-347
C-terminal
348-835

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeP_130_113
[NCBI] 		2161784 Uroviricota > Caudoviricetes > Autographivirales > Krylovirinae > Phikmvvirus
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVX47647.1 [NCBI]
Genbank nucleotide accession
MH107770 [NCBI]
CDS location
range 26576 -> 29083
strand +
CDS
GTGGCGGCGCAGCTTGAGGACCTGAGCATGAGCTACAAGCAATCCGCGTATCCCAATCTGCTGATGGGTGTGAGCCAGCAGGTGCCCTTCGAGCGCCTACCTGGCCAGCTCAGCGAGCAGATCAACATGGTATCAGACCCCGTGTCGGGGCTGCGGCGGCGCAGCGGTATCGAGCTGATGGCCCACCTGCTGCATACCGACCAACCCTGGCCGAGGCCGTTCCTCTACCACACGAACCTTGGTGGCCGCAGCATTGCGATGCTGGTGGCGCAGCACCGTGGCGAGCTGTACCTGTTCGACGAGCGGGACGGTCGCCTGCTGATGGGTCAGCCCCTGGTGCATGACTACCTCAAGGCTACCGATTACCGGCAGCTACGGGCCGCCACGGTGGCCGATGACCTATTCATCGCCAACCTGAGCGTGAAGCCCGAGGCCGACCGCACCGACATCAAGGGCGTGGACCCCAACAAGGCTGGCTGGCTGTACATCAAGGCGGGGCAGTATTCGAAGGCATTCTCCATGACCATCAAGGTCAAGGACAACGCCACTGGCACCACCTACAGCCACACGGCCACCTACGTGACGCCGGACAACGCCAGCACGAACCCCAACCTTGCGGAAGCGCCCTTCCAAACGAGCGTAGGCTACATCGCCTGGCAGCTCTACGGCAAGTTCTTCGGTGCGCCAGAGTACACCCTGCCGAACTCCACGAAGAAATACCCGAAGGTTAACCAGGATGCCGATGCGGCAACCATAGCCGGATACCTCAACCAGCGTGGGGTGCAGGACGGGTACATCGCATTCCGGGGAGATGCCGACATCAACGTCGAAGTGTCCACGGACATGGGCAACAACTACGGCATCGCGTCGGGCGGTATGAGCCTCAACGCAACGGCGGACCTGCCGGCCTTGCTGCCTGGTGTGGGCGCACCCGGTGTGGGTGTTCAGTTCATGGATGGTGCCGTCATGGCCACCGGCTCGACCAAGGCCCCGGTGTACTTCGAGTGGGATTCCGCTAACCGCCGATGGGCAGAGCGGGCCGCCTACGGGACCGATTGGGTCCTGAAGAAGATGCCCTTGGCGCTACGCTGGGATGAGGCTACCGACACCTACAGCTTGAACGAGCTGGACTATGATCGGCGCGGCTCCGGCGACGAGGACACGAACCCCACGTTCAACTTCGTCACCCGTGGCATCACCGGCATGACGACCTTCCAGGGTCGCCTCGTTCTCCTGTCGCAGGAGTACGTCTGCATGTCGGCCAGCAACAATCCGCACCGCTGGTTCAAGAAGTCGGCAGCCGCGCTGAACGACGACGATCCTATCGAGATCGCCGCTCAGGGCAGCCTGACCGAGCCGTACGAGCATGCGGTCACCTTCAACAAGGACTTGATCGTCTTCGCCAAGAAGTACCAGGCCGTGGTCCCAGGTGGTGGTATCGTGACCCCGCGAACAGCGGTCATCAGCATCACCACGCAGTACGACCTCGATACCAGGGCGGCACCCGCCGTGACTGGACGCAGCGTGTACTTCGCTGCCGAGCGTGCCCTGGGTTTCATGGGCCTGCACGAGATGGCCCCGTCGCCGTCCACGGACAGCCACTACGTCGCCGAGGACGTTACCAGCCACATCCCGAGCTACATGCCGGGGCCGGCTGAGTACATCCAGGCGGCGGCCTCCAGCGGCTACCTGGTGTTCGGCACCAGCACGGCGGACGAGATGATCTGCCACCAGTACCTCTGGCAGGGTAACGAGAAAGTCCAGAACGCCTTCCACCGATGGACGCTGCGGCATCAGATCATCGGCGCCTACTTCACTGGCGACAACCTGATGGTCCTGATCCAGAAGGGCCAAGAGATCGCCTTGGGCCGGATGCACCTGAATAGCCTGCCAGCCCGTGAGGGTCTGCAATACCCGAAGTACGACTATTGGCGGCGTATCGAAGCGACCGTCGATGGTGAGCTAGAGCTGACCAAACAGCATTGGGACCTGATCAAGGATGCCTCTGCCGTGTACCAGCTACAGCCCGTGGCCGGCGCCTACATGGAACGTACCCATCTCGGCGTGAAGCGAGAGACGAATACGAAGGTGTTCCTCGACGTGCCCGAGGCCGTGGTCGGGGCGGTGTATGTGGTTGGCTGTGAGTTCTGGTCGAAGGTGGAGTTCACTCCGCCGGTTCTCCGGGACCACAATGGCCTGCCCATGACCTCGACCCGTGCAGTGCTTCATCGGTACAACGTAAACTTCGGCTGGACCGGCGAGTTCCTGTGGCGCATCAGCGACACGGCCCGACCCAACCAGCCGTGGTACGACACGACGCCCCTTCGGTTGTTCAGCCGGCAACTCAATGCCGGGGAGCCTCTGGTGGATAGCGCTGTGGTGCCGCTGCCGGCACGGGTCGATATGGCCACGTCCAAGTTCGAGCTGAGCTGTCACAGTCCGTACGATATGAACGTCCGGGCCGTCGAGTACAACTTCAAGTCCAACCAAATCTACAGGAGGGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
74239730f2338fa8064b0b10239b371bd60039abf3b8497d49138aad8bccdcb6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8566
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50