Protein

View in Explore
Genbank accession
AIZ01710.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSALQEAMRKPGRVASPDSVPSLYRGIVTEVRSDGMLWVLIPRLSGDSPIGPMPAASYALTVGERVLIGAVEDSRSDLMIICREYGDSSAFPAFEGVHLKNPPTGPDNAVRKDYADALGSVLATNDTIVRRGVTGSILVQEAYLGGVQSAANAATRKSYVDAQVALKMPKVPTLLPGTAHDLDDYQAQDIYHQSFNAAASISMNYPVPLAGLLECFAPSTTFIYQRYTTYNTTTRIFWRAKYSTSAWGGWKEVQDVASFLTAMAGKAALVHTHVAGDITGGVFAAALLPAATTGAQGAMSAADKTKLDAATINPTASTIAMRNSAGDLTSNNYFMPSGQAQSALPQSLTRRDYVDAQVATRAASSHGHTYADISGTVPTAALPPLAINETFPVASQAAMLALTAQRGDMAIRSDNGRSYVLSTDSPGTLADWKEIMAAGQVQSVAGKTGVVSLVKGDVGLGNVDNTADTAKPVSTATQTALNAKANTSHTHLWADLTDKPTTFAPSAHVHSAADLTSGTVPVARLPLATGSAAGAMSAADKATFDVVSVDTGWVDVPLTAPWVNYDAGVHATAQVRRIGNDVEFKAFLKSGSLGTNVGVIPAGFRPVSQRWPTATFQSTAIGSTFCVIYPDGTVYLAGSGAVTYVSIECRWMLG
Physico‐chemical
properties
protein length:654 AA
molecular weight: 68410,33380 Da
isoelectric point:6,18411
aromaticity:0,07339
hydropathy:0,01208

Domains

Domains [InterPro]
DC_0604
STR
23–505
DC_0604
cd19958
STR
176–253
cd19958 DC_0578
AIZ01710.1
1 654
Architecture
STR
RBD
STR 23-505 | RBD 506-653 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Arthrobacter phage vB_ArtM-ArV1
[NCBI] 		1566993 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Arthrobacter sp.
[NCBI] 		1667 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Micrococcales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIZ01710.1 [NCBI]
Genbank nucleotide accession
KM879463 [NCBI]
CDS location
range 20005 -> 21969
strand +
CDS
GTGAGTGCACTACAGGAAGCCATGAGGAAGCCCGGGCGCGTGGCGTCCCCGGATTCGGTCCCGTCGCTGTACCGCGGCATCGTCACCGAGGTGCGCTCTGACGGCATGCTGTGGGTGCTGATCCCGCGGCTTTCTGGTGACAGCCCAATTGGCCCCATGCCGGCGGCGTCCTACGCCCTGACCGTGGGGGAACGCGTCCTTATCGGCGCTGTAGAGGACTCCCGTAGCGACCTCATGATCATTTGCCGCGAGTACGGCGATTCGTCCGCGTTCCCGGCTTTCGAGGGCGTGCACTTGAAGAACCCGCCCACGGGGCCGGACAACGCCGTGCGGAAGGACTACGCGGACGCGTTGGGGTCCGTGCTGGCCACAAATGACACGATTGTGCGCCGCGGTGTCACGGGGTCCATCCTGGTGCAAGAGGCGTACCTCGGCGGCGTCCAGTCCGCAGCGAACGCGGCCACCCGCAAGAGCTACGTGGACGCTCAAGTTGCCCTAAAAATGCCCAAGGTGCCCACCTTGCTGCCCGGGACCGCGCACGACTTGGACGACTACCAAGCCCAAGACATTTACCACCAGTCATTCAACGCCGCTGCATCCATCAGCATGAACTACCCGGTGCCACTGGCCGGGTTGCTGGAATGCTTTGCGCCGTCTACCACCTTCATTTACCAGCGGTACACCACGTACAACACCACCACCCGGATTTTCTGGCGCGCCAAGTATTCCACGAGCGCGTGGGGTGGCTGGAAGGAAGTCCAGGACGTTGCCAGCTTCCTGACCGCCATGGCTGGCAAGGCCGCGTTGGTGCACACCCACGTTGCCGGGGACATTACGGGCGGCGTCTTTGCCGCTGCCCTGTTGCCAGCGGCCACCACGGGCGCGCAGGGCGCCATGTCGGCAGCGGACAAGACCAAGCTGGACGCGGCCACCATTAACCCCACAGCGTCCACCATTGCCATGCGGAATAGCGCTGGCGACCTGACCAGCAATAACTACTTCATGCCGTCCGGGCAAGCCCAATCCGCGCTTCCCCAGTCCCTCACCCGCCGGGACTACGTGGACGCTCAAGTTGCCACGAGGGCGGCGAGCTCGCACGGGCACACCTACGCTGACATTTCCGGCACGGTGCCCACGGCTGCGCTGCCACCGCTGGCGATCAATGAGACATTCCCGGTGGCCAGCCAAGCCGCCATGCTGGCCCTGACCGCGCAACGCGGTGATATGGCGATCCGTTCCGACAATGGCCGCAGCTATGTGCTATCCACGGACAGCCCGGGCACGCTCGCGGACTGGAAAGAGATTATGGCTGCCGGTCAGGTTCAGTCCGTGGCTGGTAAGACGGGTGTGGTGTCCTTGGTCAAGGGTGACGTTGGCCTTGGGAACGTGGACAACACCGCGGATACCGCTAAGCCGGTCAGCACGGCAACGCAGACGGCGCTCAACGCCAAAGCGAACACGAGCCACACCCATTTGTGGGCGGACCTCACGGACAAGCCAACGACGTTTGCCCCGTCCGCGCATGTGCACAGCGCCGCGGACCTGACCAGCGGCACGGTGCCCGTTGCGCGGCTGCCGCTGGCCACGGGTTCGGCAGCCGGGGCCATGTCCGCCGCTGACAAGGCTACTTTTGACGTGGTGAGCGTGGACACGGGCTGGGTTGACGTGCCCCTTACGGCGCCTTGGGTGAACTACGACGCCGGGGTGCACGCCACGGCTCAAGTCCGGCGCATCGGCAATGACGTTGAGTTCAAGGCGTTTCTGAAATCGGGATCCTTGGGCACCAACGTGGGTGTGATCCCGGCGGGGTTCCGGCCCGTGTCGCAACGCTGGCCAACGGCCACGTTCCAGTCCACTGCCATTGGTTCCACGTTCTGCGTGATATACCCGGACGGCACGGTGTACCTGGCGGGGTCCGGCGCGGTTACTTACGTTTCCATTGAGTGCCGGTGGATGCTGGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b861e2b70251c29bc26994a669da4435ba44f6da21d3fe39d4c7750f56999151
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7621
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome of vB_ArtM-ArV1 - first myovirus infecting Arthrobacter sp. Simoliunas,E., Kaliniene,L., Stasilo,M. and Meskys,R. — — GenBank