Protein

View in Explore
Genbank accession
XNO99778.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,73
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MADLKAGSTVGGNPIWHAGTFPLVPAGNSLTYRGKKVYTEIDKPQADDNDFVSKARGGEYAKNVRFVEGLSLNARGGSAEFIPGPGDGADYTTVNAKIQTWYGLGFGASYGTEGVTIVFNLRNGDIKTKGNISVASGKFVIAGQAPTDNAHLTNKKYVDDRINTVSNVANAAVRKAGDTMTGVLRAEAGVVIVNKATSGEYAPRLDQVISRGVTIDFGTY
Physico‐chemical
properties
protein length:220 AA
molecular weight: 23154,61910 Da
isoelectric point:8,97956
aromaticity:0,08636
hydropathy:-0,25318

Domains

Domains [InterPro]
DC_0466
STR
1–216
DC_0466
IPR005601
STR
60–182
IPR005601
XNO99778.1
1 220
Architecture
STR
STR 1-216 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNO99778.1
1 220
Domain Start End Length (AA) Confidence
N-terminal 1 73 73 0,6771
Central domain 74 209 137 0,2560
C-terminal 210 220 10 0,4345
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-73
Central
74-209
C-terminal
210-220

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Roth80
[NCBI] 		3384144 Viruses >
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNO99778.1 [NCBI]
Genbank nucleotide accession
PQ657824 [NCBI]
CDS location
range 151989 -> 152651
strand +
CDS
ATGGCCGATTTAAAAGCAGGTTCAACAGTTGGTGGAAATCCTATTTGGCACGCAGGTACTTTTCCTCTTGTGCCGGCAGGAAACTCCCTAACTTATAGAGGTAAAAAGGTTTATACTGAGATAGATAAACCTCAAGCAGATGATAACGACTTTGTGTCAAAAGCTCGTGGTGGCGAGTATGCTAAAAACGTTCGTTTTGTAGAAGGCTTAAGCCTTAATGCTCGCGGCGGGTCAGCTGAGTTTATACCAGGTCCAGGAGATGGGGCTGATTATACCACAGTTAACGCAAAAATACAAACATGGTATGGATTAGGATTTGGGGCTTCATATGGTACTGAAGGTGTAACTATCGTCTTTAATCTACGCAATGGCGATATTAAAACTAAAGGTAACATTTCCGTTGCTTCGGGTAAATTTGTTATAGCAGGTCAAGCACCTACCGATAATGCTCACTTAACAAATAAGAAATATGTTGACGATAGAATAAATACTGTTAGCAACGTAGCTAACGCAGCAGTTAGAAAAGCCGGCGATACCATGACAGGTGTACTTAGAGCCGAAGCTGGCGTAGTTATAGTAAATAAAGCAACATCCGGTGAATATGCTCCTAGACTAGATCAGGTTATTTCACGCGGGGTAACAATAGATTTTGGCACATACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
50ec645b86bb6b20fe47f2a75eea33536d8dc44c1fb19456dbc116a48c4b120b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7218
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
KlebPhaCol: A community-driven resource for Klebsiella research identified a novel gut phage order associated with the human gut Rothschild-Rodriguez,D., Lambon,K.S., Latka,A., Costa,A.R., Mantzouratou,A., King,C., Boeckaerts,D., Sheridan,E., Merrik,F., Drobniewski,F., De Angelis,I., Saeed,K., Sutton,M., Wand,M., Andrew,M., Hedges,M., Brouns,S.J.J., Haas,P.-J., Krishnakant Kushwaha,S., Lawson,S., Fordham,S., Lee,Y.-J., Wu,Y., Briers,Y., Weigele,P. and Nobrega,F.L. 2024 — GenBank