Protein

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Genbank accession
YP_007672654.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,50
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAVTTKKTFNAVGTGGQGTTAFTPVSIELNNQDDLDVYVTLSGGTRVLQYRQSTGSTTDSNHPQVNDTTGLYFPAQSAGVTLYNYTLSTDNNTITFNSALPTGAVVSIERRTRDSSSDYTNFVGGSTIRHTDVNRAFDESNFTAQEARNKAFEIEGKIFGTEATSTSFITSDEIVDGTIVGGDISTDTITASNLAANSVGSSELADNAVDTNAIQDNAVTMAKLNSGALPTDITVASANIVDGTIVNADVSNSAAIAHSKLSGIAGGNVLLGNSSNVPTSTTLSGDVTVNSSGVTAITAGSIVTADIGNDQITNAKIADDQIDSEHYVDGSIDTAHIADANVTTAKIAGLAVTADKIADNTIINSKIAAGTIEASSLQNGCVTDNKLASNSVTTAKILDSNVTREKIADNAINHTKILNGTIGADKLDSNSVTTAKIADSNITTAKIADSAIGTAKIANDAVTADKIADAVIVTASEQAAASANDTTFFTTSASDARYFNVSTGDTIKDGDTFPDNDTTIATTAAINDRIIDLVDDVGGFVPIANETSFPNANPDVNNGAGTLVSIKALSSNLTSNGSGVATISNGTVGNATVTINGLANSTTYAANFGLIVETTSTLNTYTFHRQVPIATEVSTVAGSISNVNTVAGDISNVNAVAGNATNINAVAGNASNINSAVSNASNINSAVSNASNINSAVSNASNINTTAGSISNVNTVAGSISNVNSVASNMGTVNDFAARYRTGANNPTSSLDTGDLFFNTSANELKVYNGSAWQGGVTASGNFASITGNTFTGDNLYNDGVKAKWGTGSDLQIYSDGSNAFIANTTGDFLIRNSASNEIKIQAVSGEQSIVANANGSVDLYHDGVKMFYTSASGVHVESGGSASHLHLLDNGKARFGAGNDLEIYHDGSQSIINDTANRLQIRSDHIELMTAAGKNEYYLQATEDGAVELYYDNVKQINTTSTGVTLADDKRIDFGDGADLRIFHDGSHSYLHQSGTGELKNRAAIWKVVNEANSEIQIKATENAAVELYYDHSKKLETYASGCYVYGKVALQGSEDGNAIIEMFADEGDDAADKYQLASITNGNWEVQNYSSGSAWETNIRATGGGAVSLFYNDAKKIETAGGGINITGDVYHNTDNGSA
Physico‐chemical
properties
protein length:1141 AA
molecular weight: 117939,52290 Da
isoelectric point:4,42761
aromaticity:0,05872
hydropathy:-0,19807

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_007672654.1
1 1141
Domain Start End Length (AA) Confidence
N-terminal 1 609 609 0,7515
Central domain 610 808 200 0,4966
C-terminal 809 1141 332 0,8527
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-609
Central
610-808
C-terminal
809-1141

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSP10
[NCBI] 		885867 Uroviricota > Caudoviricetes > Autographivirales > Tangaroavirus > Tangaroavirus PSSP10
Host Prochlorococcus marinus str. NATL2A
[NCBI] 		59920 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007672654.1 [NCBI]
Genbank nucleotide accession
NC_020835 [NCBI]
CDS location
range 1 -> 3424
strand -
CDS
ATGGCAGTTACAACTAAAAAAACATTTAATGCTGTCGGGACTGGAGGTCAGGGAACAACGGCCTTCACTCCTGTCAGTATAGAACTGAATAACCAAGATGATCTAGATGTATATGTTACATTGTCAGGTGGAACAAGGGTCTTACAGTATCGTCAATCGACTGGTAGTACTACAGACTCTAACCACCCACAGGTAAATGATACAACTGGGTTATATTTCCCCGCACAAAGTGCTGGGGTAACACTTTACAATTATACATTATCCACTGATAATAACACTATTACGTTTAATTCTGCTTTACCTACAGGTGCAGTAGTCTCGATAGAACGTAGAACTAGGGATAGTTCTAGTGATTATACTAATTTTGTAGGTGGAAGTACAATTAGACATACAGATGTTAATAGAGCATTTGATGAATCTAATTTTACAGCACAAGAAGCAAGGAATAAAGCGTTTGAAATAGAAGGAAAGATATTCGGAACAGAAGCTACAAGTACATCTTTTATTACAAGTGATGAAATTGTAGATGGAACTATTGTAGGTGGTGATATATCTACTGATACTATAACAGCTAGTAATTTAGCTGCAAACTCAGTCGGATCTTCAGAGTTAGCAGATAATGCTGTCGATACTAATGCTATTCAAGACAATGCTGTCACGATGGCTAAACTTAACTCTGGAGCATTACCTACAGACATAACTGTAGCTAGTGCAAACATAGTTGATGGTACTATAGTTAACGCTGATGTATCAAACTCAGCTGCAATAGCCCATAGTAAGTTAAGTGGTATAGCTGGTGGAAATGTATTACTAGGTAATTCAAGTAATGTACCTACTTCTACAACTCTTAGTGGTGATGTTACTGTTAATAGCTCAGGTGTCACTGCAATTACTGCTGGATCAATCGTTACTGCAGATATAGGGAATGATCAAATAACAAATGCTAAGATAGCTGATGACCAAATAGATTCTGAGCATTATGTTGATGGTAGTATAGATACTGCACATATAGCTGATGCTAATGTTACAACAGCTAAAATAGCTGGGTTAGCAGTAACAGCTGATAAGATAGCTGATAACACTATTATCAATTCTAAAATAGCAGCAGGTACTATTGAAGCAAGTTCTTTACAGAATGGATGTGTTACTGATAATAAGTTAGCGTCAAACTCAGTAACTACAGCTAAGATACTTGACAGTAATGTTACAAGAGAAAAGATAGCAGATAATGCTATTAACCATACTAAGATACTTAACGGTACTATAGGTGCAGATAAATTAGATTCAAATTCAGTTACTACAGCTAAGATAGCAGACTCTAATATTACTACAGCTAAGATAGCTGATTCTGCTATCGGAACAGCTAAAATAGCTAATGATGCTGTTACAGCAGATAAAATAGCTGATGCAGTTATAGTAACTGCTAGTGAACAAGCAGCTGCTAGTGCAAATGATACAACATTCTTTACTACATCTGCATCTGACGCTAGATACTTTAATGTAAGTACAGGTGACACTATTAAAGATGGTGATACCTTCCCAGACAACGATACAACAATAGCTACTACAGCAGCTATCAATGATAGGATTATTGACTTAGTTGATGACGTTGGTGGATTCGTACCTATAGCAAATGAAACATCTTTTCCTAACGCTAACCCTGACGTTAATAACGGGGCTGGAACTCTTGTATCTATTAAAGCTCTCAGCAGCAACCTTACCTCCAATGGATCTGGAGTTGCAACCATTTCTAATGGTACTGTTGGAAATGCAACCGTTACCATTAATGGTTTAGCAAATAGTACAACGTATGCTGCTAACTTTGGACTTATTGTAGAAACAACTTCTACATTAAATACTTATACATTCCATAGACAAGTACCAATAGCTACAGAAGTATCAACCGTAGCTGGAAGTATTAGCAATGTTAATACAGTAGCTGGAGACATCAGTAATGTCAATGCTGTAGCTGGAAATGCTACTAATATTAATGCTGTAGCTGGAAATGCTTCAAACATTAACTCAGCAGTATCCAACGCTTCAAATATTAACTCAGCTGTTAGCAACGCATCTAATATTAACTCAGCAGTATCCAATGCCTCAAACATTAATACAACTGCTGGATCAATATCTAATGTTAATACAGTAGCTGGGTCGATTAGTAATGTTAACTCAGTAGCCTCTAATATGGGTACTGTTAATGACTTTGCTGCTAGATATAGAACAGGAGCTAATAACCCAACATCAAGTTTAGATACTGGAGATTTATTCTTTAATACATCTGCTAATGAACTAAAGGTTTATAACGGAAGTGCTTGGCAAGGTGGTGTAACAGCTAGTGGTAACTTTGCATCCATTACTGGTAATACATTTACTGGAGATAACTTATATAACGATGGGGTTAAAGCTAAGTGGGGTACTGGGTCGGATTTACAAATCTATTCAGATGGATCTAATGCATTTATAGCTAATACAACTGGTGATTTTCTTATTAGAAATAGTGCTAGTAATGAAATAAAAATACAAGCAGTTTCAGGTGAGCAAAGCATTGTAGCTAATGCTAATGGTTCAGTTGACCTCTATCACGACGGCGTTAAAATGTTCTACACATCAGCTAGTGGGGTTCATGTAGAAAGTGGTGGAAGTGCTTCTCATTTACATTTATTAGATAATGGCAAAGCGAGGTTTGGTGCTGGTAATGATCTGGAAATCTACCATGATGGCTCTCAATCAATCATTAACGACACAGCAAATAGATTACAAATAAGAAGTGATCATATTGAGTTAATGACTGCAGCTGGTAAGAATGAATATTATTTACAAGCTACTGAAGACGGAGCCGTAGAACTCTATTACGATAATGTTAAGCAGATAAATACCACAAGTACAGGTGTAACTCTTGCAGATGATAAACGTATAGATTTTGGAGATGGAGCAGATTTAAGAATCTTCCACGATGGATCTCATTCATACTTACATCAATCTGGAACAGGAGAGTTAAAGAATAGAGCAGCTATTTGGAAAGTTGTTAATGAAGCTAATAGTGAAATACAAATTAAAGCTACAGAAAATGCAGCAGTAGAACTCTATTATGACCACTCAAAGAAGCTGGAAACCTATGCTTCTGGATGCTATGTTTATGGTAAAGTTGCACTTCAAGGTTCTGAGGATGGTAATGCTATTATCGAAATGTTTGCTGACGAAGGTGACGATGCAGCAGATAAATACCAATTAGCATCTATTACTAATGGTAATTGGGAAGTACAAAACTATTCAAGTGGAAGTGCTTGGGAAACAAATATAAGAGCAACTGGTGGTGGAGCAGTATCACTTTTTTATAATGATGCTAAGAAGATTGAAACCGCAGGTGGTGGTATTAACATCACTGGCGATGTTTATCATAACACTGATAATGGTAGTGCTT

Genome Context

Genome Context

Tertiary structure

PDB ID
c39856ed351541d300b525fcaba6ac7c3eab8187eb9e0e26095d314eb6feb54b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5552
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Prochlorococcus phage P-SSP10 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank