Protein

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Genbank accession
YP_008771853.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TSP
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MGSKTSNYGFSLWDIGDRIEVTANEQTANWNALEDWIVKRNGYLANAKGGYRLGSNGKPLVGDATNATIDDQPAIQAALTKCKDDGGGIVFLPAGNYALKNTCVIYSNTTFIMHPQARIYRNKPNIGAFFRNGESGSSNTGYNGHGNIHVIGGYLDGNIGNYDYRFNFFSFGHGYNITFENIYMKDTQTYHAIEINSTNKAVFKNLTCDGYSLDSEFQQTTPNRKTEAIQIDGMYGQDVFGDFGAYDNTPCNDITVESCTFRNWNRGVGSHSSATGNHHRNIRVVNNHFENIEDIGVVTCMWDNAVIDSNTFQTVGGGVWLRVKDSTDETYGYVISNNTFRTVTLGTSARHAIRVSGSDDANNPFKLRTVSITGNTIENTTDTSIYVDRVWRTTISGNTINNATTSGIYITGCEFGSVTGNSIIGCGSYGIGLSGSNWFAINGNLVSNTTLSGIYLTNSKECAITGNATRRNGLAGGDNQGIRLVTDSDGCTVTGNSHVSGSGEADRAILSSGTTNRNVIVGNNGGGKAITNNSTGGATSGNL
Physico‐chemical
properties
protein length:543 AA
molecular weight: 58308,20730 Da
isoelectric point:5,88905
aromaticity:0,09392
hydropathy:-0,40700

Domains

Domains [InterPro]
DC_1696
ATT
1–65
DC_1696 IPR012334 IPR012334
IPR012334
STR
61–415
IPR012334 IPR022441
IPR011050
STR
66–404
IPR011050 IPR006626 IPR006626 IPR006626
IPR006626
Unmapped
174–197
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
IPR039448
ENZ
332–497
IPR039448
IPR011050
STR
345–542
IPR011050
IPR022441
Unmapped
385–427
IPR022441
YP_008771853.1
1 543
Architecture
ATT
STR
ATT 1-65 | STR 66-543
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_008771853.1
1 543
Domain Start End Length (AA) Confidence
N-terminal 1 62 62 0,9151
Central domain 63 532 471 0,9902
C-terminal 533 543 10 0,2236
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-62
Central
63-532
C-terminal
533-543

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage Blastoid
[NCBI] 		2880540 Uroviricota > Caudoviricetes > Ehrlichviridae > Andromedavirus blastoid >
Host Bacillus pumilus
[NCBI] 		1408 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008771853.1 [NCBI]
Genbank nucleotide accession
NC_022773.1 [NCBI]
CDS location
range 19313 -> 20944
strand +
CDS
ATGGGATCAAAGACTAGCAATTACGGTTTTAGCTTATGGGATATTGGAGATAGAATAGAAGTTACAGCAAACGAGCAAACAGCCAATTGGAATGCTTTAGAGGATTGGATCGTAAAAAGAAATGGTTACTTAGCAAACGCAAAAGGTGGATATCGACTAGGATCAAATGGTAAGCCCCTAGTTGGTGATGCTACAAACGCCACCATAGATGATCAGCCAGCAATCCAAGCGGCTCTGACTAAGTGCAAAGATGATGGAGGCGGCATTGTTTTCCTCCCTGCTGGTAACTATGCTTTGAAGAATACTTGTGTAATTTACTCTAATACAACATTCATCATGCACCCTCAAGCAAGGATATACAGAAACAAGCCAAACATCGGAGCGTTCTTCCGCAATGGCGAATCTGGCTCAAGTAACACAGGGTATAACGGTCATGGTAATATTCATGTAATTGGTGGGTATCTTGATGGGAACATTGGAAACTATGATTATAGATTCAATTTCTTCTCGTTTGGTCATGGCTACAATATCACCTTTGAAAATATCTATATGAAAGATACACAGACGTATCATGCTATTGAGATCAACTCAACAAACAAAGCAGTCTTCAAAAACCTTACATGTGATGGCTACAGCCTCGATAGTGAGTTCCAACAGACTACACCAAACAGAAAGACCGAGGCGATTCAAATTGATGGAATGTACGGTCAAGATGTGTTCGGAGATTTTGGAGCATATGACAATACCCCATGTAATGATATCACCGTTGAGTCATGTACATTTAGGAACTGGAACCGAGGAGTAGGCTCTCACTCGTCCGCAACAGGGAATCATCATAGAAATATACGAGTCGTAAACAACCACTTTGAAAACATCGAAGATATCGGAGTAGTTACATGCATGTGGGACAACGCTGTAATTGACTCAAATACATTCCAGACAGTTGGCGGCGGTGTATGGCTCCGAGTGAAAGACTCGACAGATGAGACTTACGGGTATGTCATCTCAAATAACACGTTCAGAACTGTCACACTAGGTACGTCAGCAAGACACGCCATCAGAGTAAGCGGCTCAGATGATGCCAACAATCCTTTTAAGCTTCGCACAGTTTCCATCACAGGCAACACCATTGAGAACACAACAGACACATCCATTTATGTTGACAGAGTTTGGCGAACTACCATTTCAGGGAACACAATCAACAACGCAACAACAAGCGGAATTTACATCACGGGTTGCGAGTTTGGCTCCGTCACAGGCAACAGCATCATTGGTTGTGGATCATATGGTATTGGTCTTAGCGGATCAAATTGGTTCGCCATCAATGGTAACCTAGTGAGTAACACAACCCTTTCAGGTATCTACTTGACAAACTCAAAAGAATGTGCTATCACGGGTAATGCAACCAGACGTAATGGTCTCGCTGGGGGAGATAACCAAGGAATAAGGTTAGTAACTGATTCTGACGGTTGCACTGTTACAGGCAATAGCCATGTAAGTGGAAGCGGAGAGGCAGACCGAGCTATTTTATCCAGTGGTACGACAAATAGAAATGTTATAGTAGGTAACAACGGTGGAGGGAAAGCCATCACGAATAATAGTACTGGCGGTGCTACTTCTGGTAACCTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9353f04b7825062451810800edb1e7b72cf26d64602058f17365c6996cca309f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8525
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome of Bacillus pumilus Siphophage Blastoid Mash,S.J., Minahan,N.T., Chamakura,K.R. and Kuty Everett,G.F. 2013 24309724 GenBank