Protein

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Genbank accession
YP_009598345.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MNAHTPFDAKKDWSNPYCQNSSNDPMVDALLGNAYHVVRTVYCNLGNLKLIYDFLNQYGMVLGVQSEAELKALTTKAKYARIYGFSRAGDRQVTDYLYVEGDRTGITPDDPEATGSWITVATSGSSSGGTYSGEGAYIPWVYSNGSATGGETSINVPDGTVGVPFIIINGDMQYVGRGFEFNADSLSVTLAQPLEEGDEVVFLLTGVPAVPDNPNVNDWVQINWLYNNGAAVGGEQVIAIPYTFQSVPAVYKNGLRLYKGLTTESYTADPDNQRILLTEPLATNDRLIVQIGGEVQVLESSDHTLQEVARATNVKDSEVILSTDTTQLLNGKKVIYSISEQKAYGLPALPSNIYINSVSNGQLTYSPGNITVDLVPVPNSGIALRADLASEDLELGDNLLTVKQPFTGSVVRTQHDKNAEMVSVKDFGAVGDGVNDDTAAFQKAFATCASIFIPAGTYKVTDLTLDKSAYGEQQVSVVHGNGAIITGNSVTLLGWRKVKASGLKFSVSEYVTLMDVRNCTFSDIDFGATRFGRWEELGRATYSIYWNKFNECRFAGMYAKTDIDSANFNSNVFDSCELRRRLDTDEAIFYFYETPNHKAVFSGTTFIGCDASYTAVFKVVDPHITWAVVWVGGFIDSGSKWFADGSNEVTTFDVVGARVPARDARPYTTPTANIGMQSGGIKNSRYIPAGSLSYLPRFKRTVAGEEIIRILSLPLPCSGEWTISANLKETGAGLESTAIANTTKGGGRTYDLIEHSGFSTTTFKADAGDVIEIIFDGKVGTATEIQSLSLTLGAGVPSAVEVNDTGRRSITNLSVGVATTIFSFTIPNYSQAAYDMQLVCKNKTGNGAGLLMKRASVLAAKTSGAARVNILEYSESSVAGDAGTSTNAGTCTLTSSVSGNTVNIMATLGNTGAAGITAAELVLIVKEI
Physico‐chemical
properties
protein length:928 AA
molecular weight: 99356,07640 Da
isoelectric point:4,85328
aromaticity:0,09159
hydropathy:-0,08211

Domains

Domains [InterPro]
DC_0265
STR
1–635
DC_0265
G3DSA:3.30.2020.50
ATT
296–380
G3DSA:3.30.2020.50 IPR012334
IPR011050
STR
418–609
IPR011050
IPR024535
ENZ
422–461
IPR024535
YP_009598345.1
1 928
Architecture
STR
ATT
STR
STR 1-295 | ATT 296-380 | STR 381-635 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009598345.1
1 928
Domain Start End Length (AA) Confidence
N-terminal 1 433 433 0,9913
Central domain 434 677 245 0,9789
C-terminal 678 928 250 0,9400
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-433
Central
434-677
C-terminal
678-928

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EC1-UPM
[NCBI] 		1258572 Uroviricota > Caudoviricetes > Schitoviridae > Gamaleyavirus > Gamaleyavirus EC1UPM
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009598345.1 [NCBI]
Genbank nucleotide accession
NC_041906 [NCBI]
CDS location
range 62725 -> 65511
strand -
CDS
ATGAACGCACATACCCCCTTTGATGCAAAGAAGGATTGGTCTAATCCTTACTGTCAGAACAGTTCCAATGACCCAATGGTAGATGCACTACTTGGTAATGCTTACCATGTGGTTCGTACTGTCTACTGTAACTTAGGCAATCTTAAACTTATCTATGATTTCCTGAACCAGTATGGGATGGTTCTTGGTGTACAGTCTGAAGCAGAACTTAAAGCTTTAACTACCAAAGCTAAGTATGCACGTATCTATGGCTTCTCTCGTGCAGGTGACCGTCAGGTTACTGACTACCTTTATGTAGAGGGTGACCGTACTGGCATTACCCCAGATGACCCAGAAGCAACTGGTTCATGGATTACTGTTGCTACTTCTGGTTCTTCTAGTGGTGGTACTTACTCTGGTGAAGGTGCATATATCCCTTGGGTATACAGCAATGGTTCTGCTACTGGTGGTGAAACTTCCATTAATGTACCAGATGGTACTGTAGGTGTGCCTTTCATTATTATTAATGGGGACATGCAGTATGTAGGCCGTGGCTTTGAATTTAACGCAGATAGTCTGTCCGTAACCCTGGCTCAGCCTCTGGAAGAAGGTGATGAAGTAGTATTCCTTCTGACTGGGGTTCCTGCTGTACCAGATAACCCTAATGTTAATGACTGGGTTCAGATTAACTGGTTATACAACAATGGGGCTGCTGTAGGCGGTGAGCAGGTTATTGCAATTCCTTATACCTTCCAGTCCGTTCCTGCTGTGTATAAGAATGGGCTTCGTTTGTATAAAGGATTAACTACTGAGTCATATACTGCTGACCCAGATAACCAACGTATCCTTCTTACTGAGCCACTGGCAACCAATGACCGATTAATCGTACAGATTGGCGGTGAAGTGCAGGTGCTGGAATCATCAGACCATACTCTTCAGGAAGTTGCCCGTGCTACTAACGTCAAAGATAGTGAGGTAATTCTTAGTACTGATACTACCCAATTACTGAATGGTAAAAAGGTTATTTATTCTATCAGTGAGCAGAAGGCATATGGATTACCGGCGTTGCCTTCTAACATTTATATCAACTCAGTATCTAATGGGCAGTTAACATATTCTCCTGGGAATATTACTGTTGATTTGGTTCCTGTGCCTAATTCTGGGATTGCTCTAAGAGCAGACTTAGCATCTGAGGATTTAGAGCTGGGTGATAATCTTCTTACAGTAAAGCAACCATTCACTGGTTCCGTTGTTCGAACTCAGCATGATAAGAATGCTGAGATGGTTAGTGTTAAAGATTTTGGCGCGGTTGGTGACGGTGTAAATGACGATACTGCGGCTTTTCAAAAAGCATTCGCAACATGTGCTTCTATTTTTATACCAGCAGGAACTTACAAAGTAACTGATTTGACTTTGGATAAGAGCGCCTACGGTGAGCAACAAGTTTCGGTTGTCCACGGTAACGGCGCCATTATTACTGGCAACTCAGTTACATTACTGGGATGGCGCAAAGTAAAAGCATCCGGTTTGAAATTCTCTGTAAGTGAATATGTAACGCTTATGGATGTGCGGAACTGCACGTTTTCAGATATTGATTTCGGTGCCACAAGGTTTGGACGCTGGGAAGAATTAGGGCGGGCAACTTACTCCATTTACTGGAACAAATTTAACGAATGCCGCTTCGCGGGCATGTATGCAAAAACTGACATTGACAGCGCCAACTTTAATAGCAACGTGTTCGACAGTTGTGAGTTGCGCAGGCGCTTAGATACGGATGAAGCAATTTTTTATTTCTACGAGACGCCAAATCACAAAGCTGTTTTCTCAGGAACCACCTTTATTGGATGTGACGCCAGTTATACTGCTGTCTTTAAGGTAGTAGACCCTCATATCACGTGGGCTGTCGTTTGGGTTGGTGGCTTTATTGATTCCGGCTCTAAATGGTTTGCTGATGGCTCCAACGAAGTAACTACGTTTGACGTTGTAGGGGCAAGGGTTCCTGCAAGAGATGCTCGACCTTACACGACACCAACTGCAAATATCGGAATGCAGTCTGGCGGCATAAAGAATAGTCGGTACATTCCAGCTGGCTCACTTAGTTACCTTCCAAGATTTAAACGGACAGTTGCTGGCGAAGAGATCATAAGAATTCTCTCTTTACCGTTGCCTTGTAGTGGTGAGTGGACAATTTCTGCAAACTTAAAGGAAACAGGGGCTGGCCTGGAATCTACAGCAATAGCTAATACAACAAAAGGAGGAGGCAGGACATATGACCTCATTGAACATAGTGGGTTTAGTACGACCACCTTCAAAGCTGATGCCGGTGATGTGATTGAAATCATATTTGACGGCAAAGTTGGTACCGCTACGGAAATTCAGTCTCTGAGTTTAACACTTGGTGCGGGTGTACCGTCAGCAGTGGAAGTTAACGATACAGGCAGGCGCTCGATCACTAACCTTTCGGTCGGAGTTGCTACCACGATATTCAGTTTTACAATCCCCAATTATTCACAGGCTGCATACGATATGCAGTTGGTTTGCAAAAATAAAACGGGCAACGGTGCAGGTCTACTAATGAAGAGGGCCAGCGTTCTAGCAGCTAAAACTTCTGGAGCGGCGCGTGTTAACATACTGGAATATTCAGAGAGTTCAGTGGCGGGTGATGCGGGAACTAGCACCAATGCAGGGACATGTACGTTAACTAGCTCTGTATCAGGTAACACTGTTAACATCATGGCTACTTTAGGCAATACTGGCGCCGCTGGTATAACAGCTGCGGAATTGGTTTTGATTGTTAAAGAGATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d3bc0147bb2f574cdbac73d9fe772eb617ca0be254f8c0dc7762777b706b0dbc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6418
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Bacteriophage EC1-UPM that Specifically Infects E. coli O78:K80 Sieo,C.C., Tang,G.H.S., Lau,G.L., Abdul,R.O. and Ho,Y.W. 2013-10-18 — GenBank