Protein

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Genbank accession
WPK42352.1 [GenBank]
Protein name
tail fiber with carbohydrate hydrolase
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MHFRLFNKPAAFGIDQGKPRMWIDGIYEDYDAGDPYEGRVQIHGSVGLMKVEILGGNLPPNASVFIDQMTKEVVVKWLKYTPPTIKVTEVPNGSFEDNSIWETIGPGTPATAEQGWSPNGKGNLTYRDQKGEYTVFGGWAPVTNRTRQIEITGKVEHGKSSKGNASCGVGLAWYNDKRELVRIDMGSIVDNGGKGNWYKTSGIYSAHEPEIRFVRPVIRFNRKKQNHPIHAGQIEWDHVYEIGYNEDETLWVEVKVTDSTHNVAIHRGIIEENNIWLTSRPYPLIVTDASATDYTYTHAFLKEQVWEEGEDVSTSGFEGFSAQLKSVVMDHVFPDNSSTEIGFSLVLKEVLRDYGLSDATTTGVSMTVDSKRIAVDPGVEYTDSITEINFGATLNAI
Physico‐chemical
properties
protein length:397 AA
molecular weight: 44289,96000 Da
isoelectric point:5,17169
aromaticity:0,10327
hydropathy:-0,44207

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPK42352.1
1 397
Domain Start End Length (AA) Confidence
N-terminal 1 179 179 0,4917
Central domain 180 378 200 0,1351
C-terminal 379 397 18 0,9805
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-179
Central
180-378
C-terminal
379-397

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage StenM_174
[NCBI] 		3096151 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK42352.1 [NCBI]
Genbank nucleotide accession
OR729839.1 [NCBI]
CDS location
range 36197 -> 37390
strand +
CDS
ATGCACTTCCGTTTGTTCAACAAGCCCGCTGCCTTCGGCATTGACCAAGGTAAGCCGCGCATGTGGATCGACGGGATTTACGAAGACTACGACGCAGGCGATCCTTACGAGGGCCGCGTGCAGATTCACGGCTCCGTGGGTTTGATGAAGGTGGAGATTCTGGGCGGTAACCTGCCGCCCAACGCCTCTGTCTTCATTGACCAGATGACTAAGGAAGTCGTGGTCAAGTGGTTGAAGTACACCCCGCCGACCATCAAGGTCACCGAAGTACCCAACGGTTCCTTCGAGGACAACTCGATCTGGGAAACTATCGGCCCCGGTACGCCTGCAACAGCAGAGCAAGGCTGGAGCCCCAACGGTAAGGGCAACCTGACGTACCGTGACCAGAAGGGAGAGTACACCGTATTCGGTGGCTGGGCACCAGTGACCAATCGCACGCGCCAGATCGAGATTACCGGCAAGGTAGAGCACGGGAAGTCCTCTAAGGGGAACGCATCCTGCGGCGTCGGCCTCGCGTGGTACAACGACAAGCGCGAACTCGTGCGTATCGACATGGGCAGTATTGTCGATAACGGGGGCAAGGGCAACTGGTACAAGACCAGTGGCATCTACTCCGCACACGAGCCTGAGATTCGCTTCGTGCGTCCGGTCATCCGGTTCAACCGCAAGAAGCAGAACCATCCGATCCACGCTGGTCAGATCGAATGGGACCACGTATACGAGATTGGCTACAACGAGGACGAAACCCTGTGGGTCGAAGTCAAGGTCACGGACTCCACGCATAACGTTGCGATCCATCGCGGCATTATCGAGGAGAACAACATCTGGTTGACCTCTCGTCCGTATCCGTTGATCGTGACGGACGCCTCGGCTACGGACTACACGTACACCCACGCCTTCCTGAAGGAACAGGTATGGGAAGAGGGCGAGGACGTATCTACCTCGGGCTTCGAGGGGTTCTCTGCACAGCTGAAGTCCGTCGTAATGGATCACGTGTTCCCTGACAACTCTTCTACCGAGATTGGTTTCAGTCTCGTTCTGAAGGAAGTCCTCCGGGATTACGGCCTGTCTGACGCCACAACCACAGGTGTATCAATGACTGTGGACTCCAAGCGGATCGCTGTTGATCCGGGCGTGGAGTACACCGACTCGATCACCGAAATTAACTTTGGAGCAACGCTCAATGCGATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d452650dbe8f5439ce1034f61260f5160ff857ed7a8729e6791e436cb9aac7b6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5988
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50