Protein

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Genbank accession
XYM58404.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,63
Protein sequence
MPFYQGLREAKAAAIGTIMPWTGAISQIPSGWVVCDGSSLSARDFPLLARTIQDTYNAGISTFGGTFPNYSGEIVLPALINKPLCDIEGTYFGTGNTGLPHDEDPFAFNEVSPYIGPNTDNGVPTTFNDVATDVIFTLNERQQTQNGNYYYAGKISGNTVVPGTGEGSKQVYFGPRKLGRAHIKSHRHGGRVVPSIKVNPSTEPGEGVIPWSNVQFDFDLQVTDNEPGPSGDNLTMNWTLSQDTRSPSRSGGGGGSPGRSVAGINAENPPVNFTPKTCVWNPINSEVTEPSNVRGSINGFSGGITGDPDGLVNTANDDARTGKYKVGGGDITIPSGFTTYYPDQSPRTTYDTFNSTPGWSFTLAQQTAGRQDVIRPHSHEELEINFDISGLKPETSLEVDVRAPASNLNLDNTRNIGVLQVNFNTTQPGVTCLYLIRAY
Physico‐chemical
properties
protein length:439 AA
molecular weight: 47082,35120 Da
isoelectric point:4,92524
aromaticity:0,09112
hydropathy:-0,44989

Domains

Domains [InterPro]
IPR037053
ATT
8–70
IPR037053 DC_0344
SSF88874
STR
12–75
SSF88874
IPR011083
ATT
16–74
IPR011083
XYM58404.1
1 439
Architecture
ATT
STR
ATT 8-75 | STR 90-439
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Sf-FP1
[NCBI] 		3413217 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM58404.1 [NCBI]
Genbank nucleotide accession
PV340854.1 [NCBI]
CDS location
range 34758 -> 36077
strand +
CDS
ATGCCCTTCTATCAGGGATTACGAGAAGCAAAAGCTGCCGCCATCGGCACAATCATGCCTTGGACTGGGGCAATCTCCCAGATTCCTTCGGGGTGGGTTGTGTGTGACGGCAGTTCTTTGTCGGCAAGAGACTTCCCCCTTCTTGCAAGAACAATTCAAGATACTTATAATGCAGGCATCTCTACCTTTGGTGGTACGTTTCCTAATTATAGTGGTGAGATTGTTCTGCCAGCGTTGATCAATAAACCATTGTGTGATATTGAAGGAACGTACTTTGGAACAGGTAATACAGGTCTTCCACATGATGAAGACCCATTTGCATTCAATGAAGTCTCACCTTATATTGGACCTAATACTGATAATGGTGTTCCAACAACTTTCAATGATGTTGCAACAGATGTTATCTTTACATTGAATGAAAGACAGCAGACACAAAATGGTAATTATTACTATGCTGGTAAGATTTCGGGCAATACTGTTGTTCCAGGAACAGGTGAAGGTAGTAAGCAGGTATACTTTGGACCTAGAAAACTTGGTAGGGCACACATAAAAAGTCACCGTCATGGTGGTAGAGTTGTCCCTAGTATTAAAGTCAATCCATCTACGGAACCAGGCGAAGGTGTTATCCCATGGAGTAATGTTCAATTTGACTTTGATCTACAGGTTACGGATAATGAACCAGGACCTTCTGGTGATAACTTGACTATGAACTGGACTCTTTCACAAGATACCAGATCTCCATCAAGAAGCGGTGGTGGTGGCGGATCTCCAGGTAGATCTGTTGCTGGTATTAATGCTGAAAATCCACCAGTTAACTTCACACCGAAGACGTGTGTATGGAACCCAATTAATTCTGAAGTTACTGAACCAAGTAATGTTCGCGGTAGTATTAATGGATTCTCTGGAGGCATCACTGGTGACCCAGATGGTCTAGTAAATACAGCCAATGATGATGCAAGAACAGGAAAGTATAAAGTTGGTGGCGGTGATATAACAATTCCATCTGGTTTTACTACATACTATCCTGATCAATCACCTAGAACCACATATGATACTTTTAACAGCACTCCAGGTTGGTCTTTTACTCTAGCACAGCAAACTGCAGGGCGTCAGGATGTTATTAGACCACACAGTCATGAAGAACTTGAAATTAACTTTGATATATCTGGATTAAAACCAGAGACTAGTCTTGAGGTGGATGTACGAGCACCTGCATCTAATTTGAACCTAGATAATACTAGGAATATTGGTGTATTGCAAGTCAACTTCAATACTACACAACCAGGCGTTACTTGTCTCTATCTTATCCGAGCATACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1fecae29ca83a8d91e61c7d15a054b0848d21ae30f56fedd402183c75fc4e65b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5864
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50