Protein

View in Explore
Genbank accession
UYE96767.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MPANFKKFDVKHGISVNGLPFVDENRNVTLNNLTVQGTSTVVDTRTVSQTDPIISIGSAGSTYAAASVTAGTPGRIFFSAEAFDDFALSDSVKFETTGTAPTGLVSGTTYYVKAKDTDVTSSTYRSITLSATQGGSAIPLTSTGAGTLNFTLNPLRDLGQDLGIEFNYVDSTAKKGFFGFDDSTGHFTFLKDTTYAGHDTTSDDGSPAPAFTGTKSGAEFSYAKLEPTSALTSTAAALDIDQTWNGGSNNFKAIEVDITDTASAAASSLLDISVGNDQKLLLRKDGVLSLNTTDQTGVLTLVQDADTQSTTLNLIDGTATWNAAGSTFVGLDLSFTQTAYAAGSQLLSISASANRIFVIDAEGEVVSRSEFTGGGLQTALLVDVTDTSSAANSLLLDLQVGDSSKFSVDKDGDVTAQGGLTIEGDFTANGSGRFDDRVIIQSQINNSGAYADSTEFRSDTSTINAGSSVATTFTSFFKANFSTAKLLVQVKQGTNVHATELLLVHDGTDVYMTEYGTVYNSDILVTFDAVVSGNDIVVQATNTSASVTANAHTTIKSLTTGINA
Physico‐chemical
properties
protein length:564 AA
molecular weight: 58724,61150 Da
isoelectric point:4,31478
aromaticity:0,07979
hydropathy:-0,05727

Domains

Domains [InterPro]
DC_1617
STR
8–150
DC_1617 DC_1617 IPR027412
DC_1556
RBD
348–564
DC_1556
UYE96767.1
1 564
Architecture
STR
RBD
STR 8-373 | RBD 374-564
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-TIM66
[NCBI] 		2969442 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. CC9605
[NCBI] 		110662 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYE96767.1 [NCBI]
Genbank nucleotide accession
OP053360.1 [NCBI]
CDS location
range 13513 -> 15207
strand -
CDS
ATGCCAGCTAACTTTAAGAAGTTCGACGTAAAACATGGGATTAGCGTAAATGGCCTCCCGTTCGTCGACGAAAACCGCAATGTAACTCTTAACAACCTTACAGTACAGGGTACTTCGACGGTTGTTGATACGAGAACAGTATCCCAGACAGATCCAATTATCTCCATTGGTAGTGCAGGATCTACTTATGCAGCCGCCTCGGTAACCGCCGGGACACCTGGTAGAATTTTCTTTAGTGCAGAAGCTTTTGATGATTTTGCACTCAGTGACTCTGTTAAATTTGAGACGACAGGAACTGCACCAACTGGTTTGGTTAGTGGAACTACTTACTACGTCAAAGCTAAAGATACCGACGTAACAAGCTCTACGTACAGAAGCATAACTCTTTCGGCCACCCAAGGCGGATCTGCGATTCCTCTTACTTCAACAGGCGCTGGCACTCTTAACTTTACATTAAATCCTCTTCGTGATTTAGGACAAGATCTTGGTATCGAGTTTAACTACGTAGATTCTACTGCCAAGAAGGGTTTCTTCGGTTTCGATGATAGCACTGGTCACTTTACCTTCTTAAAGGACACTACTTACGCTGGCCACGACACAACTTCTGACGACGGATCTCCTGCACCTGCATTTACAGGAACAAAGTCTGGAGCTGAATTTAGTTACGCCAAACTCGAGCCAACATCTGCTTTAACAAGCACAGCCGCAGCGCTAGATATCGATCAAACTTGGAATGGCGGCAGTAATAACTTTAAGGCAATTGAAGTTGATATTACGGACACTGCTTCAGCCGCCGCCTCTAGCCTTCTAGATATTTCTGTTGGTAATGACCAAAAGTTATTACTTCGCAAAGATGGTGTTCTATCGTTAAATACTACTGATCAAACAGGCGTATTAACTTTAGTTCAAGATGCAGATACCCAATCAACAACCCTCAATTTGATTGACGGTACAGCAACTTGGAACGCTGCTGGATCTACTTTTGTTGGATTAGATCTAAGCTTTACTCAAACTGCGTACGCAGCAGGTTCTCAGCTTCTATCTATTTCTGCTAGCGCTAATAGAATCTTTGTAATTGATGCCGAAGGCGAGGTTGTTTCTAGATCCGAGTTTACTGGCGGTGGATTACAAACTGCGTTATTAGTTGATGTTACAGACACCTCTTCTGCTGCTAATTCGCTTCTCTTAGATCTCCAAGTCGGCGATTCTTCTAAGTTTAGCGTAGATAAAGATGGAGACGTAACTGCCCAAGGTGGCTTAACGATTGAGGGTGATTTTACTGCCAATGGCTCTGGTCGTTTTGATGACAGAGTTATTATTCAGTCTCAAATAAATAATAGCGGAGCCTATGCGGACTCTACCGAATTTAGATCTGACACTTCTACAATTAATGCCGGATCTAGCGTAGCTACAACATTTACTTCCTTTTTCAAAGCTAACTTCTCTACCGCTAAGCTTCTAGTTCAAGTTAAGCAAGGAACTAATGTTCATGCTACTGAGCTCCTACTTGTCCACGACGGCACTGACGTTTATATGACAGAGTACGGAACAGTTTACAACTCTGACATCCTTGTTACTTTTGACGCTGTTGTTAGTGGAAACGATATTGTAGTCCAAGCAACAAATACTTCTGCTTCAGTTACTGCAAACGCCCATACAACTATTAAGAGCCTAACAACTGGAATCAACGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
049b690648575cf0f23f78e37df44a514c160d25c5fed1941163e9c67280af54
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6788
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Widespread yet persistent low abundance of TIM5-like cyanophages in the oceans Baran,N., Carlson,M.C.G., Sabehi,G., Peleg,M., Kondratyeva,K., Pekarski,I. and Lindell,D. 2022 36116015 GenBank