Protein

View in Explore
Genbank accession
QXO10490.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MNTPSLERYPFDYTGEATTNLVDGELHVIPPGKKNKIFSLLEGAAFSRSIKLRYGDGTYLRPWVDFQPAYLYPEATQAVGDACTGLVMIINESVSGYVYAEYQVVGDRYQHNSKAVEDLLWAAVSDDRPVFWPDILDRPSVFPPAPHTHDIFNETYGWDERVLLVDTWTTEVLETADNERLEGIRAAVQTVEAYLTQRFSQVNQIVDTHINTKHAHAETKAQAGFGSLVNIPTATIDQARNGDRLDLRLTVAGAEAILTDALTAYSANLMKQGILPISRWGNLTYLEPGVSGSFEGSAQISTVDSRMSVLEVDGTLVRLRSGTNGTSVGIYYDYMLNAVTDPLGASMIKTNTQYWPAAMGATYKPYRLFRSTSDVLWGLAYQVSAFPTLNNKYFIALTGSSFDSSKHDVAFVNSTYTHSEYGLRSITDRAHLTIIDGYVYCVDYCPWGNTRKVGFVILRVPVADIKSKTDVTWEFLKGWTATGGIGGTMTGDSINMAAREYSTVASDNPMILGDAPMEATLYRSSWMFYVVSDSPGVLRIAMGGMMHYYTTQRLQVQSIGFRCLVNVNTKTAQWVDSPKQMRVRINNGDLANISLDTTDAAKLNQMQLALAVGQGTQGGDEHGCYFIDYNTGYYMKSYITNILNVSIAWETGRIANWTNKIAAWDIVGRQVVRDRRQVDNPTFGSPVNNSLMQPYGLTGNRMLLRVLNESNNMKLVRASYGTNNNYTYNVTNVGAVKGYEPTADRVDAPEINWNYRAISYLNGSSLSMWGSVLIPYMNSAPTTINAADGTYANTTGVTWDVNELNAAALAFARTLDIGAVVTDARCDIFVPQDASLPILATIWTRHTTTLGATSRIYVTGVNYSGARTGNITGYSLKTSGYFYNDSVVDRASPGSNNNTGQQPGMTVHRVGNDLIITAGSSTQTSVPGGLAAHFACFSYNLTTGAITPTNYKLIDTNPYTGGIGWFPMILPGYGTLLLDRDMAGQTFGTLMGVLPMGNTVADFNSFNAGDKTDRFVIMAQEVKQGWMIYFTEEVPVILNGREGTAPITAIDLTTVKANPANTTFYCYAVETNGVMSYRITATEEAPTINKMYIGTIVTSGNAISNIRLNKRSRIGIYQISDTKSGTSIPVSTGLPFQRGDWSWDS
Physico‐chemical
properties
protein length:1145 AA
molecular weight: 125678,98750 Da
isoelectric point:5,53000
aromaticity:0,10393
hydropathy:-0,16943

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXO10490.1
1 1145
Domain Start End Length (AA) Confidence
N-terminal 1 269 269 0,9929
Central domain 270 520 252 0,8247
C-terminal 521 1145 624 0,3537
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-269
Central
270-520
C-terminal
521-1145

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_48
[NCBI] 		2859283 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXO10490.1 [NCBI]
Genbank nucleotide accession
MW879340 [NCBI]
CDS location
range 21558 -> 24995
strand +
CDS
ATGAACACACCGAGCTTGGAGCGTTATCCGTTTGACTACACGGGTGAAGCGACAACCAACCTGGTGGATGGCGAACTACATGTTATTCCACCGGGGAAGAAGAACAAGATCTTTTCCCTGTTAGAAGGAGCGGCGTTCAGCCGCTCTATTAAGCTGCGCTACGGTGACGGTACCTACCTGCGTCCATGGGTAGACTTCCAGCCAGCGTATCTGTATCCGGAAGCGACACAAGCGGTAGGTGATGCCTGTACGGGTCTGGTGATGATCATTAATGAATCCGTTAGCGGTTACGTCTACGCTGAATACCAGGTCGTGGGCGATCGCTACCAGCATAACAGCAAAGCCGTTGAGGATCTGCTGTGGGCTGCGGTGTCAGATGATCGTCCTGTGTTCTGGCCAGATATCCTGGATCGTCCAAGCGTGTTCCCGCCCGCACCACATACCCACGACATCTTTAACGAGACGTACGGCTGGGATGAGCGTGTGCTGTTGGTTGATACCTGGACTACTGAGGTCCTGGAAACCGCTGACAACGAACGCCTGGAAGGTATTCGCGCTGCTGTCCAAACAGTGGAGGCATACCTGACCCAACGCTTTAGTCAGGTTAACCAGATTGTGGACACCCACATCAATACCAAACACGCCCATGCTGAAACAAAAGCACAGGCTGGTTTCGGTAGTCTGGTTAACATCCCAACGGCCACGATTGATCAGGCACGTAACGGTGACCGCTTGGACCTGCGCTTAACCGTAGCGGGTGCAGAGGCAATCTTGACCGATGCCTTGACCGCGTATTCTGCTAACTTAATGAAGCAGGGTATTCTGCCGATCTCTCGTTGGGGTAACCTGACGTATCTGGAACCTGGCGTGTCCGGGTCCTTTGAGGGGTCAGCTCAGATCAGTACCGTGGATTCTCGCATGTCCGTATTGGAAGTAGACGGTACGTTAGTGCGTCTGCGTTCTGGCACCAACGGCACGTCGGTCGGTATCTATTACGACTATATGCTGAATGCGGTGACTGATCCACTGGGTGCATCGATGATCAAGACCAACACCCAATACTGGCCTGCGGCAATGGGTGCGACATACAAGCCTTATCGCTTGTTCCGTTCCACCTCTGACGTGTTGTGGGGTTTAGCGTATCAGGTATCTGCGTTCCCAACCCTGAACAACAAATACTTCATTGCACTGACGGGTTCGTCCTTTGACTCGTCTAAGCACGATGTGGCGTTTGTCAACAGCACCTACACCCACAGTGAATACGGCCTGCGTTCAATCACCGACCGTGCACACCTGACTATCATCGATGGTTACGTGTACTGTGTGGATTACTGTCCATGGGGTAACACCCGTAAGGTCGGGTTCGTAATCCTGCGTGTGCCGGTCGCCGACATCAAGTCTAAGACTGACGTCACTTGGGAATTCCTGAAAGGCTGGACGGCTACAGGCGGTATCGGTGGCACCATGACCGGTGACTCCATCAACATGGCAGCGAGGGAATACTCTACCGTCGCCAGTGACAACCCAATGATCTTGGGTGATGCACCAATGGAAGCCACACTGTACCGTAGCTCCTGGATGTTCTACGTGGTGTCTGACTCCCCGGGTGTGTTGCGTATTGCCATGGGCGGGATGATGCATTATTACACCACCCAGCGTTTGCAGGTACAGTCCATTGGGTTCCGTTGTTTGGTGAACGTGAATACCAAGACGGCTCAGTGGGTGGATTCGCCTAAGCAGATGCGTGTGCGGATTAACAACGGTGATCTGGCAAACATCAGCCTGGATACGACTGACGCGGCGAAACTCAACCAAATGCAATTGGCGTTAGCAGTTGGGCAAGGTACGCAGGGCGGTGATGAACACGGTTGTTACTTCATCGACTACAACACCGGTTATTACATGAAGTCGTACATCACTAACATCCTGAACGTATCAATCGCATGGGAAACCGGGCGTATTGCTAACTGGACCAACAAAATCGCTGCGTGGGATATTGTGGGTCGTCAGGTTGTGCGTGATCGTCGTCAGGTGGATAACCCGACCTTTGGTTCGCCGGTGAACAACAGTCTGATGCAACCATACGGCTTAACCGGTAACCGGATGCTGCTGCGTGTGCTGAACGAAAGCAACAACATGAAGTTGGTACGGGCGTCTTACGGGACGAACAACAACTACACCTACAACGTTACCAACGTGGGTGCGGTAAAAGGTTATGAACCTACTGCCGATCGTGTTGATGCGCCAGAGATAAATTGGAACTATCGTGCGATCAGTTACCTCAACGGGTCTTCCTTGTCCATGTGGGGTAGCGTACTGATTCCGTATATGAACTCAGCGCCGACCACCATCAATGCCGCTGACGGCACCTATGCGAACACCACCGGTGTGACCTGGGACGTCAATGAATTAAACGCCGCAGCACTGGCCTTTGCTCGTACGCTGGACATTGGTGCAGTAGTAACAGATGCGCGCTGCGACATCTTTGTTCCGCAGGATGCGTCATTACCAATCTTGGCGACTATCTGGACACGTCACACCACTACGCTGGGTGCGACTTCTCGTATCTATGTGACGGGTGTGAACTACTCCGGTGCTCGTACAGGTAACATCACGGGTTATTCGTTGAAGACCTCTGGGTACTTCTATAATGACTCGGTGGTTGACCGTGCATCGCCTGGTTCAAACAACAACACTGGCCAACAGCCTGGGATGACCGTACACCGTGTGGGTAATGACTTGATCATCACCGCAGGGTCGTCTACTCAGACTTCAGTACCGGGCGGGTTAGCGGCGCATTTTGCGTGCTTCTCGTATAACCTAACTACCGGTGCAATTACTCCGACGAATTATAAGCTGATTGATACTAACCCGTATACGGGCGGCATCGGTTGGTTCCCAATGATTCTGCCGGGGTATGGCACACTGCTGCTTGATCGTGACATGGCGGGTCAAACGTTTGGTACACTGATGGGTGTGCTGCCAATGGGTAACACGGTAGCGGACTTTAACTCGTTTAATGCGGGTGATAAGACCGATCGCTTTGTTATCATGGCTCAGGAAGTTAAGCAGGGGTGGATGATCTACTTCACCGAAGAAGTTCCTGTGATTCTGAATGGGCGTGAAGGCACTGCACCGATTACGGCAATCGACCTGACAACTGTGAAAGCGAATCCGGCTAACACCACGTTCTACTGTTACGCAGTGGAAACCAATGGGGTGATGTCGTATCGCATTACAGCAACGGAAGAAGCACCGACCATCAACAAGATGTACATCGGTACGATTGTCACCAGCGGTAACGCCATCAGCAACATCCGACTGAACAAGCGTTCACGTATCGGCATTTACCAAATCTCTGATACCAAGTCTGGTACGTCTATTCCGGTCTCTACCGGTCTGCCGTTCCAACGTGGTGATTGGTCGTGGGATTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
da7fd26cca207fb792d8146f53a531ebe46fff6ed63ebf980bd808e2324eb163
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2740
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_48 Kim,S.G., Lee,S.B. and Park,S.C. 2021-01-07 — GenBank