Protein

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Genbank accession
AFV51478.1 [GenBank]
Protein name
phage tail fibers
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MANVIKTVLTYPLDGSTTDFNIPFEYLARKFVVVTLLGVDRRVLTLTTDYRFATRTVIATNRAWGPADGYTQIEIRRVTSATERLVDFTDGSILRAYDLNVAQIQTMHVAEEARNMTADTIGVNNDGHLDARGRRIVNLANAVDDRDAVPFGQLKALGQGAWQSRNEALQFRNEAEQFKNQAATSRTAAETARAQAETSKIQSEAAKTASETARDRAIQAQNAASASATAAGQHEQAAEAQAANSLASANRSKTEADRSEAEADRAKTEADKLANLNDFSGSLKEVTPTRVSFNRELAASGAGVRSMTGSAGIPYTGAWREGKGEINLTVDENGNTGLVRAVGTPLVLYWNPNGDTCVSQVKYNVDSGSRQIKGSLEVGHGSNSGTAITSWGESAQGAWASQINLKWYAGGVQVGPVRGGGTDCQGLYRSVSQGKQVDYWQDPSTGQHRFYNNIGGIALTVHANGDLQMAWGGYLSQMLTQRSPKRWSWVHLGAMSVSNGAVLNLPFDVRGLRGFFGFGGERGETVYKQFTFPPLDCNFQINRKGDWQVFQLTNNGTRLIRRYGWSEGSDPYNFYCEPVA
Physico‐chemical
properties
protein length:580 AA
molecular weight: 63031,08250 Da
isoelectric point:7,66817
aromaticity:0,08621
hydropathy:-0,46310

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil
DC_0264
STR
1–575
DC_0264
AFV51478.1
1 580
Architecture
ATT
STR
ATT 1-131 | STR 132-575 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage IME15
[NCBI] 		1239382 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Ebriosvirus
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFV51478.1 [NCBI]
Genbank nucleotide accession
JX872508.1 [NCBI]
CDS location
range 33050 -> 34792
strand +
CDS
ATGGCTAACGTGATTAAGACTGTGCTGACTTATCCGCTGGATGGCTCGACTACGGACTTCAACATCCCGTTCGAGTATCTGGCCCGTAAGTTTGTCGTGGTGACTCTGCTTGGTGTAGACCGCCGAGTCCTGACGTTGACCACCGATTACCGATTCGCTACCCGCACGGTCATTGCAACCAACAGGGCGTGGGGGCCAGCCGATGGCTACACTCAAATCGAAATCCGCCGAGTGACTTCGGCCACTGAGAGACTGGTGGACTTTACTGATGGCTCGATTCTCCGAGCGTATGACCTGAACGTCGCCCAAATCCAGACCATGCACGTTGCTGAGGAGGCCCGTAATATGACCGCCGATACTATCGGTGTCAACAACGATGGCCACTTGGACGCCCGTGGTCGCCGTATCGTGAACCTTGCGAACGCTGTAGATGACCGCGATGCGGTTCCCTTCGGTCAACTCAAGGCTCTTGGGCAGGGCGCTTGGCAGTCCCGCAATGAGGCCTTGCAGTTCCGCAATGAGGCCGAACAGTTCAAGAACCAAGCGGCCACTTCCCGTACCGCTGCGGAGACTGCGCGGGCGCAAGCAGAAACCTCAAAGATTCAATCCGAGGCCGCTAAGACTGCCTCTGAGACTGCCCGTGACCGCGCCATTCAGGCCCAGAACGCTGCGTCTGCTTCCGCAACCGCTGCTGGCCAACATGAGCAGGCCGCTGAGGCTCAGGCTGCGAACTCCCTTGCGAGTGCGAACCGCTCTAAGACTGAGGCCGACCGCTCGGAGGCTGAGGCTGACCGTGCGAAGACCGAGGCGGACAAACTGGCTAACCTGAACGACTTCTCTGGGTCTCTTAAGGAGGTCACTCCGACCCGCGTGTCTTTCAACCGTGAGCTGGCAGCGTCCGGTGCAGGCGTCCGCTCTATGACAGGTTCCGCCGGAATACCATACACTGGGGCGTGGCGAGAAGGTAAAGGCGAGATTAACCTGACCGTAGACGAGAACGGAAACACTGGCTTAGTGCGGGCTGTTGGGACTCCGTTGGTTCTCTACTGGAACCCTAATGGAGACACTTGCGTAAGTCAGGTGAAGTATAACGTAGACAGCGGTAGCCGCCAGATTAAAGGCTCACTGGAAGTTGGACACGGTTCTAACTCTGGAACCGCGATTACCTCTTGGGGCGAAAGCGCTCAGGGCGCCTGGGCATCACAAATCAACCTTAAGTGGTACGCTGGTGGAGTTCAGGTAGGCCCTGTTCGTGGAGGCGGTACGGACTGTCAAGGACTGTATCGGTCTGTCTCCCAAGGCAAGCAGGTGGATTACTGGCAAGACCCATCCACAGGGCAGCACCGGTTCTACAACAACATTGGCGGAATTGCCCTGACCGTCCACGCTAACGGTGACCTTCAGATGGCATGGGGCGGTTACTTGTCCCAAATGCTCACCCAGCGTTCCCCTAAGCGCTGGTCTTGGGTACACCTTGGTGCTATGTCTGTGAGCAACGGTGCAGTTCTGAACCTTCCATTCGATGTGCGAGGCCTCCGTGGGTTCTTTGGGTTTGGTGGCGAGCGTGGCGAGACTGTCTACAAGCAGTTTACCTTCCCACCGCTTGACTGCAACTTCCAGATTAACCGTAAAGGCGACTGGCAGGTGTTCCAGTTAACAAACAACGGAACACGGTTGATTCGCCGATATGGCTGGTCTGAGGGCAGCGACCCCTACAACTTCTACTGCGAACCTGTCGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
48a76770cd2334492cb72572d876c777940b66c438a5dbb0fd37c6615842ff11
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7032
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of IME15, the First T7-Like Bacteriophage Lytic to Pan-Antibiotic-Resistant Stenotrophomonas maltophilia Huang,Y., Fan,H., Pei,G., Fan,H., Zhang,Z., An,X., Mi,Z., Shi,T. and Tong,Y. 2012 23166248 GenBank