Protein

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UniProt accession
V5UR90 [UniProt]
Protein name
Uncharacterized protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSGVDPEIFRRSSLSDQDVLQTAIDYATTNGFFVKLNPNIEYKVTTISVTCDVFGPGFISRKSDTTEDLIQVNTNSVRIVNVTIDGTRTSGSSAANNIMINGRTGVVLDRVVSKASGGHSITIRDTPVGGGNTVANCLVDGTRSGYGIYLRNVRGETIKDTEIQSAYSDGLVLSNATFTTSPVTISKVHAHDNGGNGITIQFITNSSTPVADQVLISECKSHNNGQNGIVCQTSHSIVSNNRSYNNGTTTSHQGMLYNGTFITSTGNVSYNNTGVGFDFGDCRSSSSNGDISHSNGWLGFEINACEEFTLSGFISHGNLKGKSPADLQAEVLVHKVLVDMRSPD
Physico‐chemical
properties
protein length:344 AA
molecular weight: 36597,96080 Da
isoelectric point:5,68728
aromaticity:0,06395
hydropathy:-0,24535

Domains

Domains [InterPro]
IPR012334
STR
14–249
IPR012334
IPR011050
STR
16–293
IPR011050
IPR006626
Unmapped
74–102
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
V5UR90
1 344
Architecture
STR
STR 14-293 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
V5UR90
1 344
Domain Start End Length (AA) Confidence
N-terminal 1 16 16 0,9232
Central domain 17 333 318 0,9870
C-terminal 334 344 10 0,5704
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-16
Central
17-333
C-terminal
334-344

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage pSb-1
[NCBI] 		1414738 Uroviricota > Caudoviricetes > Schitoviridae > Gamaleyavirus > Gamaleyavirus Sb1
Host Shigella boydii
[NCBI] 		621 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AHB79437.1 [NCBI]
Genbank nucleotide accession
KF620435 [NCBI]
CDS location
range 14200 -> 15234
strand -
CDS
ATGTCAGGCGTTGATCCTGAGATTTTTAGACGGTCATCATTATCAGATCAGGACGTATTGCAGACAGCAATAGACTATGCGACTACAAATGGTTTTTTTGTAAAACTAAATCCAAATATTGAATATAAAGTAACAACCATCAGTGTTACATGCGATGTGTTTGGTCCTGGGTTCATTTCTCGCAAAAGTGATACAACTGAAGACTTAATACAAGTCAATACTAACTCCGTAAGGATTGTAAATGTAACTATAGATGGAACAAGAACGTCCGGTTCTTCAGCTGCCAATAACATTATGATTAATGGTCGCACAGGTGTTGTGCTGGACCGTGTAGTATCAAAGGCTTCGGGAGGCCACAGCATAACAATACGCGATACCCCAGTCGGCGGTGGTAACACGGTAGCTAACTGTTTAGTTGACGGCACTCGCTCTGGTTATGGTATCTACCTGAGAAATGTTCGCGGTGAAACTATAAAGGACACCGAAATTCAATCCGCGTATTCTGACGGGCTTGTGCTATCTAACGCTACGTTTACTACCTCGCCAGTCACTATATCGAAAGTTCATGCGCATGATAACGGCGGAAACGGAATTACTATTCAGTTCATCACTAACTCGTCGACACCGGTAGCTGACCAGGTATTGATCTCCGAGTGCAAGTCTCATAACAACGGTCAAAACGGTATTGTTTGCCAGACGTCTCACTCAATAGTTTCAAACAACAGAAGCTATAACAACGGCACAACAACGTCACACCAGGGAATGCTTTATAATGGCACGTTTATAACGTCGACGGGCAATGTGTCGTATAACAACACTGGTGTTGGTTTCGATTTTGGGGACTGCCGTAGTTCAAGTTCAAATGGTGATATATCGCACTCTAATGGGTGGTTAGGCTTTGAAATTAATGCGTGTGAAGAGTTCACGTTAAGCGGTTTCATATCTCATGGAAATCTAAAAGGTAAATCGCCAGCTGATTTGCAAGCTGAAGTATTGGTCCACAAGGTACTGGTGGATATGCGTTCACCGGATTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
79454968b942777856e78abd41f35653eb332c084577cf9937f7597e744f1549
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8995
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50