Protein

View in Explore
Genbank accession
QXO12389.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSKQIKGSVQVGRYALSQGRNLVRSLNGLPFDGTGNLEINAYTKDEFEKIISVLPLSHYGSFSFLPAGVYGSFEGASDVPGYRYRRIHVENDGTLIILRPGTNGAKRGLYYSYLDNILTTTSLNNAINSNKEYKPGYFGSSYTAKMAYASDSRVVAGLAQNNAGENYTFISWANNTLNDTQHVGSIVPSSIIQPNAGSMRFVMTGNTEIFFFVEVSTGNNLIMEVRSVPISQIQASATTLTVTEYPNWTTNSFYGNVYTNQNIVLNNNKMSSVASDQPYVLIPAGGTGEAYMTGVDIYAAQNTSGMIRLRVVGDCWCTTQTANIRPKHSYSFLLNPSTKVATLEAGNTAPLTITQTGNNMSVTGNTYTTDPILTVNGGRGNIVMSYYYFNNGTTIGIGSQNLGSAPTYIMRANYPNATSIYDTLQVRNHTSTNWLLGSMKTSYGSPVGAEVMGYEWVTGNRYKVASWDANSQYRLSLNQTAPTPTFTFGSVGLGTIKGFQPTTNRKFIDNTNNNKLFISTISGSTVTTNGGVFVESIKLSSPLSYDQDLNTSGSMSISNTLLQTLKNQQLANATIPVDLNNKSTITLYVPQQSDIPAFALISGITPTFSNYMKIIEVNVNTRTGVISTLTFKRLVYEGGNTIGGFSSDATYGLASGAVGLTIYDAGSFYFIGGVDPYMYKTLGDTNSTTWRAKVTKSTQQMDSFIISGSYQHHTPGNGQLPWAVPGVGFGYIDFTLNAGDDRVRTIFQPVGTTLAQYNAWTDTGSPILLAGQDVAQGFVIYFTENTPVLLSGKSFTMPIQNIDLSTVKANPANSTFYIYVTMKEGLAQYLATETVIAETGTTAYNTLWIGTVTTNAIQIDTINILKRSRLDVFGASLEAAGSSFPVSYGLPSATGIINW
Physico‐chemical
properties
protein length:899 AA
molecular weight: 97305,93720 Da
isoelectric point:7,60173
aromaticity:0,10790
hydropathy:-0,13204

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXO12389.1
1 899
Domain Start End Length (AA) Confidence
N-terminal 1 60 60 0,9875
Central domain 61 259 200 0,5243
C-terminal 260 899 639 0,4980
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-60
Central
61-259
C-terminal
260-899

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_49
[NCBI] 		2859284 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXO12389.1 [NCBI]
Genbank nucleotide accession
MW879344 [NCBI]
CDS location
range 75215 -> 77914
strand +
CDS
ATGAGTAAACAAATAAAAGGAAGCGTACAAGTTGGTAGATACGCTTTATCACAAGGACGAAACTTAGTCCGATCTTTAAATGGGTTACCATTTGATGGTACTGGTAATTTAGAAATAAATGCATATACAAAAGATGAATTCGAAAAAATAATTAGCGTTTTACCACTATCCCACTATGGTTCATTTAGCTTTTTACCTGCTGGTGTATATGGTTCTTTTGAAGGTGCGAGTGATGTTCCTGGTTATAGATACAGAAGAATACACGTAGAAAATGATGGTACATTAATTATTTTACGTCCAGGAACTAACGGAGCTAAGCGTGGTTTATATTATTCATATCTAGATAATATATTAACAACAACATCTCTGAATAACGCGATAAACTCAAATAAAGAATATAAACCTGGTTATTTTGGTAGTTCTTATACTGCTAAAATGGCATATGCTAGTGATTCTAGAGTTGTTGCTGGATTAGCACAAAACAATGCAGGTGAAAATTATACCTTTATATCATGGGCTAATAATACATTAAATGATACACAGCATGTGGGTTCAATTGTACCATCATCTATTATACAACCTAATGCGGGTTCTATGAGATTTGTAATGACGGGAAATACGGAAATATTTTTCTTCGTAGAGGTTAGTACTGGTAATAATTTAATTATGGAAGTACGCTCAGTTCCTATTTCACAAATACAGGCATCAGCAACAACATTAACAGTTACTGAATATCCAAACTGGACAACAAATTCATTTTATGGAAATGTTTATACGAACCAAAATATTGTACTGAATAATAATAAAATGAGTTCAGTGGCATCAGATCAACCATATGTATTAATACCCGCTGGTGGTACTGGTGAAGCATATATGACTGGTGTTGATATATATGCTGCACAAAATACATCTGGAATGATACGTTTGAGAGTTGTAGGTGACTGTTGGTGTACAACACAAACTGCAAACATTCGTCCAAAACACAGTTATAGTTTCTTATTAAATCCATCTACTAAAGTTGCTACACTAGAAGCTGGTAATACCGCACCATTAACTATTACACAGACTGGTAATAATATGTCTGTCACTGGTAATACATATACTACTGACCCAATACTTACTGTTAATGGTGGGCGTGGTAACATAGTTATGTCATATTACTATTTTAATAATGGAACAACAATTGGTATTGGATCTCAAAATTTAGGTTCAGCACCTACTTATATCATGAGAGCTAATTATCCAAATGCTACTTCAATTTATGATACTTTACAAGTTCGTAATCATACTAGTACTAATTGGCTTTTAGGATCAATGAAAACTTCATATGGTTCACCAGTTGGTGCTGAAGTTATGGGATATGAATGGGTTACAGGAAATAGATATAAGGTAGCTTCGTGGGATGCAAATTCACAATATCGTTTATCATTAAACCAAACAGCCCCTACACCAACATTCACATTCGGTTCAGTTGGATTAGGTACAATTAAAGGATTCCAGCCAACTACAAATAGAAAATTCATCGATAATACCAATAATAACAAATTGTTTATATCGACAATTTCTGGAAGTACTGTTACAACAAATGGTGGTGTTTTTGTAGAGTCAATTAAATTAAGTTCCCCATTATCATATGATCAAGATTTAAATACATCTGGTTCAATGAGTATAAGTAATACATTATTACAAACATTAAAAAATCAACAATTAGCTAATGCAACAATTCCAGTAGATTTGAATAATAAGTCAACCATAACATTATATGTACCACAACAATCTGATATTCCAGCATTTGCATTGATTTCTGGAATAACCCCAACATTTTCTAATTATATGAAAATTATAGAAGTGAATGTTAATACTAGAACTGGAGTAATTAGCACTCTAACTTTTAAAAGACTTGTATATGAAGGTGGAAATACAATTGGTGGTTTTAGTTCAGATGCTACATATGGATTAGCTAGTGGGGCAGTTGGATTAACAATTTATGATGCTGGTTCATTTTACTTTATTGGTGGAGTAGATCCTTATATGTATAAAACATTAGGAGACACCAATAGTACTACATGGAGAGCCAAAGTTACTAAGAGCACACAACAAATGGACTCATTCATTATCAGTGGTTCTTACCAACATCATACCCCAGGAAATGGTCAATTACCGTGGGCAGTTCCTGGTGTTGGTTTTGGATATATTGATTTTACACTAAATGCTGGGGATGATAGAGTACGTACAATATTCCAACCAGTAGGTACTACATTAGCTCAATACAATGCATGGACAGACACTGGTAGTCCTATTTTATTGGCTGGACAGGACGTTGCACAGGGATTTGTAATATATTTTACAGAGAATACTCCAGTACTTTTATCAGGAAAATCATTCACTATGCCAATTCAAAATATTGATTTGTCAACAGTTAAAGCTAATCCTGCTAATAGTACTTTTTATATCTACGTAACGATGAAAGAAGGTTTAGCACAATATTTGGCTACAGAAACAGTAATAGCAGAAACAGGAACTACAGCATATAATACACTATGGATTGGTACAGTGACTACAAATGCAATTCAGATTGATACGATTAATATTTTAAAACGTAGTCGATTAGATGTATTTGGTGCATCACTAGAAGCTGCTGGTTCTTCATTCCCTGTTAGCTATGGTCTACCATCAGCAACAGGTATTATCAATTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4d72db00bfa16dd564acea21f6fa67e0292891336d164f514ee38f3a6764b3e4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2843
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_49 Kim,S.G., Lee,S.B. and Park,S.C. 2021-01-07 — GenBank