Protein

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Genbank accession
VFR13460.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,78
Protein sequence
MDNLQRIQLVAGRGAHCQEFDPERKLGLKKKVMSLIKWSNSSIFGNGSHTADSEYNRLIYGISSWFPEKSPVMTLDAQWDGKLHDASPFTWLGDRYRMRLLRGLTLDSAGPGPEGGHGDLPDVDQAGEYGNTLYSRDAIYNAGLLYGVGLMKFQLDGKILYLFSGLRVTGDYPPGFVALSGYDPTVKPEYGDDRFAYYGYVAYGELPSVSPQKSILIQNRRGIGIVAPPILGTTYYYMTTVTVGSRTLSLPEPLATFTNGETEYTDRTDNPGASTVKLYRDTKPLVRTELDGFQ
Physico‐chemical
properties
protein length:294 AA
molecular weight: 32586,34820 Da
isoelectric point:5,85478
aromaticity:0,11565
hydropathy:-0,39218

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
VFR13460.1
1 294
Domain Start End Length (AA) Confidence
N-terminal 1 22 22 0,9139
Central domain 23 221 200 0,6087
C-terminal 222 294 72 0,3790
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-22
Central
23-221
C-terminal
222-294

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SPFM14
[NCBI] 		2528684 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
VFR13460.1 [NCBI]
Genbank nucleotide accession
LR535912 [NCBI]
CDS location
range 113304 -> 114188
strand +
CDS
GTGGATAACCTCCAGCGTATACAACTGGTGGCAGGCCGTGGGGCGCATTGTCAGGAGTTTGACCCAGAACGTAAGTTGGGGCTGAAGAAAAAAGTGATGTCCCTGATAAAGTGGTCGAACTCCAGCATATTCGGAAATGGATCGCATACTGCCGATAGCGAATACAACCGACTCATCTATGGGATAAGTAGCTGGTTCCCAGAAAAAAGCCCGGTCATGACACTCGATGCACAGTGGGACGGTAAACTCCATGACGCGTCACCGTTTACGTGGTTGGGTGACCGCTATCGGATGCGCCTGCTGCGCGGTTTAACACTCGACAGTGCGGGACCTGGTCCGGAAGGCGGTCATGGCGATTTACCTGACGTTGACCAGGCTGGGGAGTACGGCAACACGCTGTATAGCCGTGATGCGATTTATAACGCGGGTTTGCTGTACGGTGTGGGCTTGATGAAGTTCCAGCTAGACGGTAAAATTCTGTATCTGTTTAGTGGTCTTCGTGTGACGGGTGATTATCCGCCAGGGTTTGTGGCCCTTTCTGGATACGACCCAACTGTTAAGCCGGAGTACGGTGATGACCGCTTTGCGTATTACGGGTACGTGGCGTACGGTGAATTACCTAGCGTCAGTCCGCAGAAATCAATTCTAATTCAGAACCGTCGCGGTATCGGCATCGTGGCTCCACCGATACTGGGGACAACGTATTACTACATGACCACCGTGACAGTGGGAAGTCGGACACTGTCATTACCTGAACCTCTGGCAACGTTCACTAACGGGGAAACTGAGTATACTGACCGAACAGATAACCCTGGGGCTTCGACCGTGAAGCTGTACCGCGACACCAAACCTCTGGTGCGTACGGAGTTGGATGGATTCCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ee91ec49cfd0d343e3367bdfcc460559a79ee87c229380cb83cfc264dd7f6667
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2736
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50