Protein

View in Explore
Genbank accession
ARW57948.1 [GenBank]
Protein name
long tail fiber proximal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,71
TF
Evidence RBPdetect2
Probability 0,53
Protein sequence
MADILKPAFRATSGLDAGGEKVINVSKADFNTKTDGVNVEFFIEENTIQEYDSTRGYRKNFAVMFDGRIWTAKEDIAAPAGTFQEPRWTALRTDAKWKYVTSGANNALKSGDYISVSTETSDVGFVLPNTPQDGDTIVIKDVGGKVGYNSLKVKISNQSIIRFNVPVSEVIITKARAESIFIFSNRQWQFYSYEEDEHAIRVTSAAEHRATAGEHIFRTHANPGLVKVMLPKFANNGDIIYFTDLDGLGPIHHLQLRTFDDSTSIGKAGVHQAEYRTSGDGLVVFDAAEKVWRTWDGDLRTRLRIIRDDVKLMPNESVMVFGTNNAIEKTINVELPLSVALGDKVRIAMNYMRKGQKVVIKAAEGDTIATSKSLLQFPKRSEYPPEVEWVQVTSLTFDGTQDYVPIIELSYIEDGTKHYWVVSTNDPTVERVDSKTDETRKRLGVIALASQTQANVDKENNPEKELAITPETLANRTSTKSRRGISRLATTAEVVQDSNFAFLDDVIVTPKKLNQRVATETSRGLAEIATQTETNQGTDDTTIITPKKLEARRATENMAGIAKLVSTVGTTAGVDRATKGTNVYDYDNNTDIVTPKSLAQQKATYTEQGSLFIATANEVISGVSQEGFQTAVTPVELHKKTATETRIGFSELATQAETDAGTDDFRIVTPKKLNDRKAREDLTGLARIATQVEFDAGTLDNVISTPLKVKTHFNDTARTSVVTDSGLVEQGTLWNHYTLDIQEASETQRGTARLATQGEVDTGTDDKTVVTPLKLHKKKATESTEGIVKIATQVETVAGTSSITAVSPKNLKHVIQVEKTWEASPILRGLVKISENAITWEGNNVDGSTKPLENYEKSGYAISPYELNKTLANYLPKMGQAEDSRNLDGLDSSQFIRRDIDQTVNGKLTLTKETTVSAPIVSTSTAKFDSVTSVKSVTIGDGTGDAVFNMLGKDNPWNVSSLTSKETLEFKSGDTNALVINKNGNLTSAGQIAAPSVDVSKSYKLNGVNVLTSETIGVTPVVSVGSTTQKLVIKTVDAGKIDIYDKDSPSTPYTVLTTKNAVDIVGNNFVKKIGDNMSGRLTVNAAMSIIMDQDKAMLPLSSETIGTWSTEITKKTHYDKLPGYVVPVFVEGEEGGSTGIVERYEEVKSIGTMSQFGVSAAYTYRIWTPRPQVPQDNHNAVSMYMQMWDSARNTWGQWSRMFTSEAPPTAADIGAVSTAGSAFDNLKIHKWLQIGNVRIEPDETTRTVKFTWVDNP
Physico‐chemical
properties
protein length:1256 AA
molecular weight: 137578,66230 Da
isoelectric point:5,54398
aromaticity:0,07006
hydropathy:-0,39005

Domains

Domains [InterPro]
DC_1986
ATT
10–138
DC_1986 DC_1209
IPR048391
ATT
1103–1202
IPR048391
ARW57948.1
1 1256
Architecture
ATT
STR
ATT
STR
ATT 10-138 | STR 343-1102 | ATT 1103-1202 | STR 1203-1244 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ARW57948.1
1 1256
Domain Start End Length (AA) Confidence
N-terminal 1 1017 1017 0,7990
Central domain 1018 1216 200 0,1050
C-terminal 1217 1256 39 0,6613
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-1017
Central
1018-1216
C-terminal
1217-1256

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage CBH8
[NCBI] 		2006940 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Winklervirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
b1ec4017d7aaa0a8297b73b35148bd028537ea5af5cd72f1a2845d3706756cb1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5683
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50