Protein

View in Explore
Genbank accession
UTC25218.1 [GenBank]
Protein name
putative tail-fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MARPTDDIIIWANQDIDLPSTGRPNKSKPIDDLIGKGFDKGQKPAAEEFNYLLNLTTGWVDWIVNEKFPELEDDITRRLNELETRLEGEISDLKDYVNSKVEELKREIQDVQDAVDQLREDTDEKVDDINDTLSRMGNLQVSQVTIPTGGSATLTVPTECAQLLIMGYYTADGVESRDYWESKLSLDGVVINTTPFYGFVTGSRGHGHHRREILPFSQLVDMQLAAGNTIEFKYDSNRGGNTSTFTVLYLKGLNTPSPDEPTAVVITPNNATIQAGTQQQFVATVLPATVAADYPVSWSVADPSLGSIDSNGLYTSLPGVSGTQSVIGSVSTGLASTSTITQHIYLTNITIGAVPPGLLAGRTYTIPVSYSPAGYTESVVTSSTDSTIATLSASGQLVITAPGTVTLTLTGANSGVSASVTITATEEVIPEVYLKIANNFSEIAAAGEVAKGSARENIGVSYTISTSPPTTGSGYAVGHVWYQVEE
Physico‐chemical
properties
protein length:486 AA
molecular weight: 51979,13580 Da
isoelectric point:4,43619
aromaticity:0,06996
hydropathy:-0,17037

Domains

Domains [InterPro]
DC_0413
STR
1–475
DC_0413
SSF58113
STR
42–131
SSF58113 G3DSA:2.60.40.1080 G3DSA:2.60.40.1080
G3DSA:1.20.120.20
STR
63–141
G3DSA:1.20.120.20 IPR003343 IPR003343
Coil
Unmapped
79–121
Coil IPR003343
UTC25218.1
1 486
Architecture
STR
STR 1-475 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage vB_PcaM_P7_Pc
[NCBI] 		2961681 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pectobacterium carotovorum
[NCBI] 		554 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UTC25218.1 [NCBI]
Genbank nucleotide accession
ON712643 [NCBI]
CDS location
range 26048 -> 27508
strand +
CDS
ATGGCAAGACCGACAGACGACATCATTATATGGGCCAACCAAGACATCGACCTCCCCAGCACGGGTCGTCCAAATAAGTCCAAGCCTATAGATGATCTTATAGGTAAAGGTTTTGACAAGGGACAAAAACCAGCGGCTGAAGAATTCAATTACCTCCTCAACCTTACCACAGGATGGGTAGATTGGATCGTCAATGAAAAATTTCCTGAGTTGGAAGACGACATTACTCGCCGTCTGAATGAGCTTGAAACAAGGCTCGAGGGGGAAATTTCAGACCTTAAGGATTATGTAAACTCCAAGGTAGAGGAGCTAAAGCGAGAAATTCAGGATGTTCAAGATGCCGTTGACCAGCTTCGGGAAGATACCGATGAGAAGGTTGACGATATCAACGATACTCTCAGCAGAATGGGCAACCTACAGGTTTCTCAGGTGACAATACCTACGGGGGGGTCAGCTACTCTAACCGTCCCGACTGAGTGTGCGCAGCTCTTGATTATGGGTTATTATACGGCTGACGGGGTAGAATCCCGTGATTACTGGGAAAGCAAGCTGTCGTTAGATGGTGTCGTGATAAATACCACCCCGTTTTATGGGTTTGTTACAGGATCACGGGGTCATGGTCACCATAGAAGGGAAATACTACCTTTCAGTCAATTGGTGGACATGCAACTCGCCGCAGGAAACACCATTGAGTTTAAATACGACAGTAACCGTGGCGGAAACACCAGTACATTCACCGTTTTGTATCTGAAGGGTCTCAACACTCCAAGCCCCGATGAACCAACGGCTGTCGTGATAACACCAAACAATGCTACTATACAAGCGGGGACTCAACAACAGTTTGTTGCGACAGTTCTACCTGCGACAGTGGCAGCGGATTACCCGGTGTCTTGGTCAGTAGCTGATCCTTCGTTGGGGTCTATCGACAGTAACGGACTATATACCTCCTTGCCGGGCGTTAGTGGGACCCAGAGTGTTATCGGGAGCGTCTCAACCGGGTTGGCTAGCACCTCTACCATTACGCAGCACATCTACCTAACCAATATCACCATCGGGGCCGTTCCTCCCGGGCTATTGGCTGGTCGGACCTATACGATTCCAGTGTCATACAGCCCTGCTGGATATACAGAGTCTGTTGTTACCAGCTCCACAGATTCAACAATTGCCACTTTGTCAGCTAGTGGTCAATTGGTTATAACTGCCCCAGGGACGGTGACTTTAACATTGACTGGAGCTAACTCCGGGGTTTCTGCGTCAGTAACGATAACGGCGACAGAAGAGGTTATTCCTGAGGTGTATCTCAAAATAGCCAATAACTTCTCAGAGATCGCTGCGGCGGGAGAGGTTGCTAAAGGATCCGCACGAGAGAACATCGGGGTTAGTTATACCATATCGACCAGCCCCCCGACTACAGGTAGTGGATATGCAGTAGGGCACGTTTGGTATCAGGTGGAGGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1826f7a53ac93c2a814e97ae5044b61d43ba0292be37efd243f59afc07421964
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7616
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Pectobacterium carotovorum phage vB_PcaM_P7_Pc is a new member of the genus Certrevirus Naligama,K.N. and Halmillawewa,A.P. — — GenBank