Protein

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Genbank accession
AHL18917.1 [GenBank]
Protein name
DUF2479 domain-containing protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MTNYIMANSYAFDGTDDFIHGVYEVDETLTTVKILLNGTDTNLNAIAGFTNGTTFMADVSTIKSQITLTTVVTMIMYNGTKELARCPVPIYSQANPPVPKSADKKYTLALDLVKDTENVVLISRIADKDLTSVLVKLTNNGEAINLVGRTPLFECQLPAQTGEYANFVRDDGIANGNMIIVDAEQGIIQYNFVKETFSKVGAINIAYFALETPVGDIVKRVTTRNFKIIVTDSAIEGKINADDYISDIESLKAEIEIRLAPVIAEMVQLKADVADASAQMDEIEALITANQVIKTADAVNWQKQKITDDTGANLLTTGSDTSKDILDIIKTAGIGLRTFYAVSGAVNNPTANTPLRGISHLTTATTGWVIGWDSFGNSYSTFLNGTAGWVLPWKENATMSDVANQLATAVSTLNTRMDSMQNIQLFDNSGVPIVNLDTDSGLDIYTELNKVPAGMYMTRISGTAGTTNPNTNVPPTTIRGYTYIEVQGTWGNLYGVGSNQTMVMNQLNNGVWQGWRVQDARDTGWINITGFNSGWSTDATNPPAYRKVGNKVSLRGVVHMDTAAKKGIIATLPAGYRPMVGNQNGWICARQTTGVNFMAEVYVSSAGNLEVVWINGNGTQGIWLTPIEFYID
Physico‐chemical
properties
protein length:632 AA
molecular weight: 68556,70500 Da
isoelectric point:4,73238
aromaticity:0,08070
hydropathy:-0,07120

Domains

Domains [InterPro]
DC_0893
ATT
1–103
DC_0893 IPR018913 Coil
G3DSA:2.60.40.3350
ATT
104–236
G3DSA:2.60.40.3350
DC_1681
STR
120–632
DC_1681
AHL18917.1
1 632
Architecture
ATT
STR
ATT 1-255 | STR 256-632
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage LP-032
[NCBI] 		1173746 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Listeria monocytogenes
[NCBI] 		1639 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AHL18917.1 [NCBI]
Genbank nucleotide accession
KJ094025 [NCBI]
CDS location
range 40646 -> 42544
strand -
CDS
ATGACTAACTATATCATGGCAAACTCCTACGCCTTTGACGGCACGGATGATTTTATTCATGGCGTTTACGAGGTAGACGAAACATTAACTACTGTTAAGATATTACTTAACGGAACCGATACAAACTTAAATGCAATTGCAGGATTCACTAATGGGACAACCTTTATGGCTGACGTTTCCACTATCAAATCTCAAATCACATTAACTACTGTGGTTACAATGATTATGTATAATGGAACTAAAGAGCTTGCGAGATGTCCTGTTCCTATCTATAGCCAAGCAAATCCACCAGTTCCAAAATCAGCTGATAAGAAATACACACTTGCTTTGGATTTAGTAAAAGACACAGAAAATGTGGTGCTTATATCCCGCATCGCGGATAAGGATTTAACGTCCGTATTAGTTAAGTTAACCAATAACGGTGAAGCAATTAACTTAGTCGGACGTACTCCATTATTTGAATGTCAATTACCCGCACAAACAGGTGAGTATGCTAACTTCGTCCGTGATGATGGGATAGCAAATGGCAATATGATTATTGTAGATGCCGAACAAGGAATCATTCAATACAACTTTGTTAAAGAGACTTTCTCCAAAGTAGGAGCCATCAACATTGCTTATTTTGCTTTAGAAACACCAGTTGGTGATATTGTAAAACGTGTCACAACACGTAACTTTAAAATCATTGTAACAGATAGTGCTATTGAAGGAAAGATAAATGCTGACGATTACATCTCTGACATTGAGTCGCTTAAAGCTGAGATTGAAATTAGGCTTGCTCCTGTAATTGCTGAAATGGTTCAACTGAAAGCAGATGTGGCAGATGCTAGTGCACAGATGGATGAGATAGAAGCACTGATTACAGCTAACCAAGTAATCAAAACAGCTGATGCAGTTAACTGGCAGAAACAGAAGATTACTGATGACACAGGTGCCAACTTACTTACAACTGGCTCAGACACTTCAAAAGATATTCTTGATATTATAAAAACAGCAGGAATAGGTTTACGAACATTCTATGCAGTATCAGGTGCTGTAAATAACCCAACGGCTAATACTCCTTTAAGAGGAATTTCTCATCTAACAACAGCTACAACCGGATGGGTAATTGGATGGGACTCCTTTGGAAACTCTTATTCAACTTTCTTAAATGGCACAGCTGGTTGGGTACTTCCTTGGAAAGAGAACGCCACAATGTCTGATGTTGCTAACCAATTAGCAACCGCAGTTTCTACCTTAAACACTAGAATGGATTCCATGCAGAACATCCAGCTATTTGATAATAGCGGTGTTCCTATAGTAAATCTAGATACGGACAGTGGATTAGATATTTACACAGAGCTAAATAAAGTTCCGGCTGGTATGTATATGACACGAATTTCTGGTACTGCTGGAACAACAAATCCTAATACTAATGTTCCTCCTACCACCATCCGGGGATATACCTATATTGAGGTACAAGGTACTTGGGGGAATTTATATGGAGTAGGCTCCAACCAGACTATGGTAATGAACCAACTAAATAACGGAGTGTGGCAAGGATGGAGAGTGCAAGATGCACGAGATACTGGCTGGATAAATATCACAGGATTTAATTCTGGATGGTCAACTGATGCTACAAACCCTCCGGCATATCGTAAAGTAGGTAATAAGGTTTCATTACGTGGAGTTGTTCACATGGATACCGCTGCTAAGAAAGGTATTATCGCAACACTTCCTGCTGGTTATCGTCCAATGGTAGGTAATCAAAATGGTTGGATATGTGCACGTCAAACCACTGGTGTTAACTTTATGGCAGAGGTTTATGTAAGCAGTGCAGGTAACTTAGAGGTTGTATGGATAAATGGTAACGGAACACAAGGTATTTGGTTAACGCCAATAGAATTTTATATTGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bec6ba6247139349a61dc94337bfe5a00a65576fe71b2dea5b2b7031b469364c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7632
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50