Protein

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Genbank accession
XMN00754.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TSP
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MNPQFSQAGGSVSKDVNKQSIARVYGVKMSEVAYLKAGLVLNGYKVLFDKTTQTCWKSGNATGTSISWQVSGSSLNLVTTTGSYVLPLFDILANLGSGEGLLHIGSVATIAQLSTVSPVTVGQRIQVTEYALGYVVGGGNFIVQKSSDYTVDGGKVVASATSGLVFVREEYYASRTVKPEWYGCRGKGSAIPDTVPFKTMLGALVNGDYIRLMANAVYYNSFPNNSQATDGWTITADNITLDGVGGATLSRATPSSASYSGFTTLKIAGSKNPRLVGSLLITSDDPTNRPLYAYQSLTKIDSREIFTSPLANTLGLWASGVDGLYIDKSVILERAVFPYFANNGTKNKKVFCTARKSGQIYPQPTSASSDLALGSTFKLDACSDFIMEVVANDSAYAGIESESNNVNGSITLVTNRAYHAGLHLWNRCKNITYKVSATDIVEGGGVITGYGCEACSGDVTAYNAQYVAAFIGNSATTPVISCNVKGSGYGVTDAVVFYTTAANNAYIQHCNVDITAVHADVFSIGTGRQSAIKFNGGQYCDIKVNAKDFDYIFSLGMGANNKFNVAYNAFNTAFSYSDQRSFDNEYKYTDPAGSVYHLQAKGSSYEYRSDAVTNPVLGYKALLRKQIVTDGFVNPNLPQTTASVGGFYYDPTTKYVRVNL
Physico‐chemical
properties
protein length:660 AA
molecular weight: 70599,32750 Da
isoelectric point:8,29478
aromaticity:0,11061
hydropathy:-0,07697

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–92
G3DSA:3.30.2020.50 IPR059934 DC_0726
G3DSA:3.30.2020.50
ATT
1–100
G3DSA:3.30.2020.50
XMN00754.1
1 660
Architecture
ATT
RBD
STR
ATT 1-100 | RBD 101-168 | STR 169-660
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XMN00754.1
1 660
Domain Start End Length (AA) Confidence
N-terminal 1 192 192 0,9911
Central domain 193 614 423 0,9723
C-terminal 615 660 45 0,8855
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-192
Central
193-614
C-terminal
615-660

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Madison
[NCBI] 		3374132 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XMN00754.1 [NCBI]
Genbank nucleotide accession
PQ368523.1 [NCBI]
CDS location
range 34842 -> 36824
strand +
CDS
ATGAATCCGCAATTTAGTCAGGCCGGTGGTTCCGTCTCTAAAGACGTGAACAAACAATCTATCGCACGTGTATACGGCGTTAAAATGAGCGAAGTGGCTTATTTGAAAGCCGGATTAGTATTGAATGGTTATAAGGTGTTGTTTGATAAAACAACCCAAACTTGTTGGAAAAGTGGCAACGCTACAGGTACATCGATTTCCTGGCAAGTCTCTGGTAGCTCTCTGAACTTAGTAACTACTACTGGCTCGTATGTACTACCCCTTTTTGACATACTTGCAAACCTTGGTTCAGGCGAGGGACTTCTTCACATAGGAAGTGTAGCTACCATTGCTCAATTATCCACAGTCTCCCCCGTAACGGTAGGTCAGCGCATACAAGTTACCGAATATGCTTTAGGTTATGTAGTAGGTGGTGGTAACTTTATTGTACAAAAGTCATCTGATTATACGGTTGACGGTGGGAAGGTAGTGGCATCCGCAACGTCGGGGTTGGTCTTCGTACGTGAGGAATACTATGCGTCCCGCACTGTTAAGCCCGAATGGTACGGTTGTCGTGGTAAAGGCTCGGCCATACCCGACACAGTTCCGTTTAAAACGATGCTCGGTGCCCTTGTTAATGGCGACTACATCAGATTGATGGCCAATGCTGTTTATTACAATAGCTTTCCCAATAATTCGCAGGCAACAGATGGGTGGACAATAACCGCCGATAATATCACATTAGACGGTGTGGGCGGCGCCACCCTGTCCCGCGCAACACCTTCATCAGCAAGCTACTCTGGTTTTACCACGCTCAAGATTGCCGGCAGTAAAAACCCGAGACTGGTGGGGTCACTGCTCATCACCTCTGATGACCCCACCAACAGGCCTTTATACGCATACCAAAGTTTGACCAAAATCGACTCAAGGGAGATTTTCACATCTCCCTTGGCCAATACGCTAGGCCTGTGGGCGTCTGGCGTTGATGGCCTTTATATCGATAAATCGGTAATACTGGAAAGAGCTGTCTTCCCTTACTTCGCCAATAACGGCACAAAGAACAAAAAGGTGTTCTGCACTGCCAGAAAATCAGGTCAGATTTACCCGCAGCCGACGTCAGCAAGTTCAGATTTGGCACTCGGTAGTACCTTTAAGCTGGATGCGTGTTCCGACTTTATCATGGAGGTTGTTGCCAACGATTCGGCATATGCAGGCATTGAGTCTGAGAGTAACAACGTCAATGGCAGCATAACCCTAGTAACCAATAGGGCGTACCATGCCGGACTCCATTTATGGAACAGATGTAAGAACATTACTTACAAGGTCTCCGCGACGGATATCGTTGAGGGCGGTGGCGTTATTACAGGGTATGGTTGCGAGGCATGTAGCGGTGACGTTACAGCCTATAACGCACAATACGTCGCGGCATTCATAGGAAATTCCGCAACAACCCCCGTTATAAGCTGTAACGTAAAAGGCTCTGGGTATGGCGTGACTGATGCTGTTGTATTCTATACAACAGCTGCGAATAATGCCTATATCCAGCACTGTAACGTGGATATTACTGCCGTGCACGCTGATGTATTCTCCATCGGCACTGGCCGACAATCAGCTATCAAGTTCAATGGTGGGCAGTACTGTGACATCAAAGTAAATGCCAAAGATTTTGACTACATATTTTCACTTGGCATGGGGGCAAATAACAAATTTAATGTTGCATATAATGCATTCAATACAGCGTTCTCGTACTCAGATCAACGATCTTTTGACAATGAGTATAAATACACTGACCCTGCTGGCAGTGTGTACCATTTGCAGGCAAAGGGAAGTTCTTATGAGTACAGGTCAGATGCTGTCACTAACCCGGTTCTTGGGTATAAGGCACTGCTAAGAAAGCAGATAGTTACAGATGGGTTTGTTAACCCGAACCTGCCACAAACAACTGCATCGGTGGGTGGTTTTTACTATGACCCAACCACGAAATATGTAAGGGTTAATCTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0d0ac3b90e93f1c97310cab8b5cfdef84fec7ee53002cc879d70ca311524f9bb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7373
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of Klebsiella phage Madison Scott,M.R., Mora,D.A., Lancaster,J., Lessor,L. and Gill,J.J. 2015-03-31 — GenBank