Protein
View in Explore- Genbank accession
- YP_009952541.1 [GenBank]
- Protein name
- minor tail protein
- RBP type
-
TSP
- Protein sequence
-
MPPVYDRRPLALDRNPMWSLFDEPAKLPKLDPALIWKEWLRGIKELTGIDLSSPVALVESIADLIGDLLDPANLIEVMAQIFGYIGPPLQGLNQLAQWVGQHVFGLIDPRRLAQIPVGSIVGTAPNLLPNGSFSDSTAVDDPDSLWVRDTATYRSAPASVRTKADGTIHELLSVDAIPVHQGQKLDVSGYVRWANLTAANGAIGLGVMAYSDDGEQQRVIVASANNPTGTQVTWQKLSGQFEVPEGVSSVRVLLVVNQDATAGNVWFDDLAASMGSNRMKIDWIEGLRDELASAFAAAAAAAQAFGDFLQNQWQNMLDGVKGGVGGVITDLINKLQHITPSGLFDASRLTNILNMPPLDVHQILDLSDELAELGDGIANVFDDIRQTWQGWWRALTGKSRTQVTADETAEQLAALAAAQVANSIAIAELQAYQDNGYSGLSGMDDFEREVDWGLGDLYWAVTNEYGGTTNNGYVRIRNGQVEWVDQGNGACSYRFRCIRPDIAHTETDFQRVTLVVGTISAEPHFITDSTTQHSRIYVRMSDDETRYVFVEFGGLDKAQFGYRNGGNEVMVGSVFNCPRGSVGGTFTLEAGTAGGVRVFRLLWNNRPLSGGVWSDVNNVTALGEDCRGWGFGMAAGSRLGIAQTTPNAYGAVTVTDNIPAPVVGSGCRVYRSSTSSDGHSSNSTTKFHNNFFDYVDVCSRDVVYNPADNCSITINSTGFYMFYACVPWNGDDTELSVARGLILYRNGQPVADLMRHWPGGSGETRGAWAARGSYATGVYVNAGDTFHLYQYNNSQSLLGSAYWGGGNASGTRCYWGCSATGNIVTATT
- Physico‐chemical
properties -
protein length: 828 AA molecular weight: 89514,79240 Da isoelectric point: 4,74665 aromaticity: 0,09541 hydropathy: -0,15894
Domains
Domains [InterPro]
DC_0105
STR
83–828
STR
83–828
G3DSA:2.60.120.260
STR
125–282
STR
125–282
1
828
Architecture
STR 83-828
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
828
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 433 | 433 | 0,7244 |
| Central domain | 434 | 640 | 208 | 0,1771 |
| C-terminal | 641 | 828 | 187 | 0,9683 |
Note: Constraints were applied during segmentation.
Fixed 88 C-terminal predictions appearing before Central domain
Fixed 88 C-terminal predictions appearing before Central domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-433
1-433
Central
434-640
434-640
C-terminal
641-828
641-828
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Mycobacterium phage Amelie [NCBI] |
1913035 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
YP_009952541.1
[NCBI]
Genbank nucleotide accession
NC_051613
[NCBI]
CDS location
range 20414 -> 22900
strand +
strand +
CDS
ATGCCTCCCGTCTACGACCGCCGACCGCTGGCGCTCGACCGCAACCCCATGTGGTCGCTGTTCGACGAGCCCGCCAAGCTGCCCAAGCTCGACCCGGCGCTGATCTGGAAAGAGTGGCTGCGCGGCATCAAAGAGCTGACGGGCATTGATCTGTCGAGCCCGGTCGCGCTCGTCGAGAGCATCGCCGACCTGATCGGTGACCTGCTCGACCCCGCAAACCTCATCGAGGTGATGGCGCAGATATTCGGCTACATCGGGCCGCCGCTGCAGGGGCTCAACCAGCTCGCGCAGTGGGTGGGGCAGCACGTGTTTGGCCTCATCGACCCGCGACGGCTGGCGCAGATCCCGGTCGGCTCGATCGTCGGCACGGCGCCGAACCTGCTGCCCAATGGCTCGTTCTCCGACTCGACGGCCGTCGACGACCCTGACTCGCTGTGGGTGCGCGACACCGCGACGTACCGCTCGGCCCCGGCCTCGGTGCGCACGAAGGCTGACGGCACGATCCACGAGCTGCTCAGCGTCGACGCAATCCCGGTGCACCAGGGGCAGAAGCTCGACGTGTCGGGCTACGTGCGGTGGGCCAACCTGACCGCAGCCAACGGCGCGATCGGCCTCGGCGTGATGGCGTACAGCGACGACGGCGAGCAGCAGCGGGTGATCGTCGCCTCTGCCAACAACCCGACCGGCACGCAGGTGACGTGGCAGAAGCTCTCCGGGCAGTTCGAGGTGCCCGAGGGCGTGTCGAGTGTGCGTGTGCTCCTGGTCGTCAACCAGGACGCGACAGCGGGCAATGTCTGGTTCGACGACCTCGCGGCGAGCATGGGCTCGAACCGGATGAAAATCGACTGGATCGAGGGGCTGCGCGACGAGCTGGCGTCAGCCTTCGCCGCCGCTGCTGCCGCTGCGCAGGCGTTCGGCGACTTCCTGCAGAACCAGTGGCAGAACATGCTCGATGGCGTCAAGGGTGGCGTCGGCGGCGTGATCACCGATCTGATCAACAAGCTGCAGCACATCACGCCGTCTGGCCTGTTCGATGCGTCGCGGCTGACGAACATCCTCAACATGCCGCCGCTGGACGTGCACCAGATCCTCGACCTGAGCGACGAGCTGGCCGAACTCGGCGACGGCATCGCCAACGTGTTTGACGACATTCGCCAGACCTGGCAGGGCTGGTGGCGTGCCCTCACCGGCAAGTCGCGCACGCAGGTGACTGCCGACGAGACCGCCGAGCAGCTCGCCGCGCTGGCGGCGGCGCAGGTCGCCAACAGCATTGCGATCGCCGAACTGCAGGCGTACCAGGACAACGGTTATTCCGGCCTCAGCGGCATGGACGACTTCGAGCGCGAGGTCGACTGGGGGCTCGGTGACCTGTACTGGGCCGTCACGAACGAGTACGGCGGGACCACGAACAACGGGTACGTGCGAATCCGCAACGGGCAGGTCGAGTGGGTTGACCAGGGCAACGGCGCCTGCTCGTACCGATTCCGCTGCATCCGGCCGGATATTGCCCACACCGAAACCGATTTCCAGCGCGTGACACTCGTCGTCGGGACGATCAGCGCCGAGCCGCACTTCATCACCGACTCCACGACGCAGCACTCACGCATCTACGTGCGCATGTCGGACGACGAAACCCGGTACGTGTTCGTCGAGTTCGGCGGCCTGGACAAGGCGCAGTTCGGCTACCGCAACGGCGGCAACGAGGTGATGGTCGGCTCGGTGTTCAACTGCCCTCGCGGCAGCGTCGGCGGCACCTTCACGCTTGAGGCTGGAACGGCCGGCGGGGTGCGAGTGTTCCGTCTGCTGTGGAACAACCGGCCGCTCAGCGGCGGCGTGTGGAGTGACGTCAACAACGTGACGGCGTTGGGTGAGGACTGCCGGGGCTGGGGCTTCGGGATGGCGGCCGGTAGCCGATTGGGTATCGCTCAAACGACACCGAACGCCTACGGCGCTGTCACGGTCACCGACAACATCCCGGCGCCCGTGGTCGGCTCTGGCTGCAGGGTCTACCGATCCTCGACGAGCAGTGACGGCCATTCGAGCAACTCCACGACGAAGTTTCATAACAACTTCTTCGACTACGTGGACGTGTGCTCGCGCGACGTTGTGTACAACCCGGCCGATAACTGCTCAATCACGATCAACTCGACCGGCTTCTACATGTTCTACGCCTGCGTGCCGTGGAATGGTGACGACACCGAGTTGTCCGTCGCGCGCGGACTGATCCTGTACCGCAATGGGCAGCCGGTCGCTGACCTCATGCGGCATTGGCCGGGCGGCAGCGGCGAGACGCGCGGCGCATGGGCGGCGCGTGGCAGCTACGCCACCGGCGTCTACGTCAACGCTGGCGACACGTTCCACCTGTACCAGTACAACAACAGTCAGTCGCTCCTTGGTAGCGCCTACTGGGGCGGTGGCAATGCGTCTGGCACCAGGTGCTACTGGGGGTGTTCGGCGACCGGCAACATCGTCACGGCGACGACGTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
3b7aa441e32a5bef381208df749bce75d61757e9207cc4698040023c639b5d2d
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50