Protein

View in Explore
Genbank accession
AGI11566.1 [GenBank]
Protein name
DUF2479 domain containing protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MADAVKEYDIILDVTRPYENQRVIGRLADRDLTSILVKLTKTGLPINLTGYSIYFECRLPYQDGEQINYVRDDGSVYQNLEIVDASQGIFRYTFIKEVWSKVGYMPEAYFALEQLVGTVNKRVTTQNFSLTIQNNATNNSMQTPPFTSDIEAFKDAIRAELADVQTELDNTSDDVTALTGNVATLDTEVKALQASIDANQVVLKTDITNYQPYAFTNANGTRIDLGTLTALSPGLPTLDAKLYEGVSPASLADKATIGFPPQITTTTAVSFQLDVTTGKSGTKILVLRTVPDSVTYEMHVDTSGAVLPWFTYASKEQMVTADTNVQSAASLDATTKANTAQQNAITTATANAKTYTDNVVWSSRVLKANTNVYPNASQTVTFGKNITNMRNGIILVWRWDSSNINYTYTYVPKRHVEAREGVTVGSVIAYSNDTVKDYAGNRTIVKMVRLYNDRLVGHDNNANTTNWSNRVRLEEVLEY
Physico‐chemical
properties
protein length:479 AA
molecular weight: 53002,68050 Da
isoelectric point:5,02431
aromaticity:0,08768
hydropathy:-0,28142

Domains

Domains [InterPro]
DC_1249
STR
1–472
DC_1249
G3DSA:2.60.40.3350
ATT
5–138
G3DSA:2.60.40.3350 Coil
IPR018913
ATT
6–157
IPR018913
SSF58100
Unmapped
105–227
SSF58100
AGI11566.1
1 479
Architecture
ATT
STR
ATT 1-157 | STR 158-472 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage LP-110
[NCBI] 		1173748 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Listeria monocytogenes FSL J1-208
[NCBI] 		393119 Bacteria > Firmicutes > Bacilli > Bacillales > Listeriaceae > Listeria

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGI11566.1 [NCBI]
Genbank nucleotide accession
JX126919 [NCBI]
CDS location
range 25264 -> 26703
strand +
CDS
ATGGCTGATGCAGTAAAAGAATATGACATTATACTAGACGTAACAAGACCTTATGAAAACCAAAGAGTTATAGGTCGCCTTGCCGACAGAGATTTAACGTCTATTCTAGTTAAGCTAACCAAGACTGGACTGCCTATCAATTTAACTGGCTATTCAATCTATTTTGAATGTCGTCTTCCTTATCAAGACGGCGAACAAATTAACTATGTACGTGATGACGGTTCTGTTTATCAGAACTTAGAAATAGTAGATGCTTCACAGGGAATATTCCGCTACACATTTATTAAAGAAGTGTGGTCAAAAGTTGGATACATGCCAGAGGCATACTTTGCATTAGAGCAACTTGTTGGAACAGTTAACAAACGTGTTACTACCCAGAACTTCTCTCTAACTATTCAAAATAATGCAACGAATAATTCCATGCAAACACCACCATTTACATCAGATATTGAAGCTTTCAAAGATGCTATCAGAGCAGAGCTTGCAGATGTACAAACAGAACTAGATAATACTTCTGATGATGTAACAGCATTGACTGGAAATGTAGCAACACTTGATACAGAAGTAAAGGCACTACAAGCTTCTATTGATGCCAATCAAGTAGTTCTTAAAACAGATATTACAAACTATCAACCGTACGCTTTTACAAATGCTAACGGAACTAGAATTGATTTAGGAACATTGACAGCACTATCGCCCGGACTACCTACATTAGATGCGAAGCTATACGAAGGTGTTTCTCCCGCTTCATTGGCTGACAAAGCAACTATAGGTTTCCCACCACAGATAACAACCACAACCGCTGTAAGCTTTCAATTAGATGTTACAACAGGAAAATCTGGAACAAAGATTTTAGTATTAAGAACTGTACCAGATAGTGTGACTTATGAAATGCACGTTGACACGTCCGGAGCGGTGCTTCCTTGGTTTACTTATGCTTCCAAGGAGCAAATGGTAACAGCAGATACAAACGTGCAATCAGCGGCTTCTCTGGATGCTACAACGAAGGCTAACACTGCTCAACAAAATGCCATAACAACAGCTACAGCAAATGCGAAAACATACACAGATAATGTTGTATGGTCTTCACGTGTTCTTAAAGCCAACACTAACGTATATCCAAACGCAAGTCAAACAGTTACCTTTGGTAAGAATATCACAAATATGCGTAATGGAATTATCCTTGTTTGGAGGTGGGATTCTTCTAACATAAACTACACCTACACTTACGTACCTAAACGACATGTAGAAGCTCGTGAAGGAGTTACTGTAGGTTCAGTTATAGCATATTCAAACGATACTGTAAAGGATTATGCTGGTAACCGTACAATAGTGAAGATGGTAAGACTATACAATGACCGATTAGTAGGTCACGATAACAATGCCAATACTACAAACTGGTCAAATAGAGTACGGCTAGAGGAAGTATTAGAGTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0f554a960a4c18ef7f2a67362502999353905d37ac281c5bc55f437a679d3606
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8337
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50