Protein

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Genbank accession
QIN95112.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKFPKEFDNGITVEGIKSPRWANREHTRLSCTATFAPGQVVPFGASLTDPEPHGRAVYDHILAGLAGKIAEYERPSVTKEDLQAELDKILPDVMLGLATPDEIELARNLRIQIKAME
Physico‐chemical
properties
protein length:117 AA
molecular weight: 12954,68170 Da
isoelectric point:5,38722
aromaticity:0,05983
hydropathy:-0,32137

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage BIM BV-45
[NCBI] 		2713154 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas fluorescens
[NCBI] 		294 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIN95112.1 [NCBI]
Genbank nucleotide accession
MT094430.1 [NCBI]
CDS location
range 36306 -> 36659
strand +
CDS
ATGAAGTTCCCTAAAGAGTTTGACAACGGCATCACCGTGGAGGGCATCAAGTCCCCGCGCTGGGCCAACCGCGAACACACGCGGCTATCCTGTACAGCGACGTTCGCTCCCGGTCAAGTGGTGCCCTTCGGGGCCAGCCTGACCGACCCGGAGCCGCATGGCCGCGCTGTGTACGACCACATCTTGGCTGGCCTTGCCGGTAAGATCGCGGAGTATGAGCGTCCCTCTGTAACGAAAGAAGACCTGCAAGCGGAGCTGGATAAGATCCTGCCCGACGTTATGCTCGGTTTAGCGACACCGGACGAGATTGAACTCGCCCGCAACCTTCGTATCCAGATTAAAGCAATGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
25d4ba28ed19552e1805559a757bc9a24c47e4dec765da00be551df26b82e1b1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9376
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Biopesticide 'Multiphage' based on phages of phytopathogenic bacteria Pseudomonas syringae and Pseudomonas fluorescens used in agriculture to control plant diseases Pilipchuk,T.A., Gerasimovich,A.D., Ananyeva,I.N., Kolomiets,E.I., Popov,F.A. and Novik,G.I. 2015 — GenBank