Protein

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Genbank accession
YP_009856751.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,55
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MVVDNAGDTGIHLINHTDATMVDVISIGSNVNGFILSNMPNSRMVGCRAEWSEAHGYKIEGNWGTGQGSGGMLMSGCSTDRNGQNGFDITSTGNAPINIDGTITRRDGRNGGAGGGGYAGISVANATNPIIISNHTNYPGVDDDGSGVNSPDYGLSATGSTYVFLSSGFLHAEVDGFFDGGGNAQLRRGPNVGERTGSTATPTDAFSEPWTAYGNMDVTGYFVTNSGQSNGQWNIFSGAPDALRLGSGGGGLSVSEGGAARMGVATLVGGTATVANTSIAANDRIFLTSQVDGGTPGFLRVSARTVGTNFTITSSSGTDTSTVAWFIVRPA
Physico‐chemical
properties
protein length:331 AA
molecular weight: 33678,33790 Da
isoelectric point:4,69907
aromaticity:0,07553
hydropathy:-0,18218

Domains

Domains [InterPro]
DC_0770
STR
1–260
DC_0770 IPR056204
YP_009856751.1
1 331
Architecture
STR
ENZ
STR 1-260 | ENZ 261-328 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009856751.1
1 331
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0027
Central domain 11 222 213 0,9884
C-terminal 223 331 108 0,8943
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-222
C-terminal
223-331

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptomyces phage JXY1
[NCBI] 		2708562 Uroviricota > Caudoviricetes > Beephvirinae > Manuelvirus JXY1 >
Host Streptomyces lividans
[NCBI] 		1916 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Kitasatosporales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009856751.1 [NCBI]
Genbank nucleotide accession
NC_048854 [NCBI]
CDS location
range 1225 -> 2220
strand -
CDS
GTGGTTGTTGATAACGCTGGTGACACTGGCATTCATCTGATCAACCACACCGACGCAACGATGGTCGACGTCATCTCCATCGGATCCAACGTCAACGGGTTCATCCTCTCCAACATGCCGAACAGCCGAATGGTCGGCTGCCGAGCCGAGTGGTCCGAGGCTCACGGATACAAGATCGAGGGCAACTGGGGAACTGGCCAGGGATCTGGCGGCATGCTCATGAGTGGATGCTCCACTGACCGCAACGGTCAGAACGGCTTCGACATCACGAGCACCGGCAACGCTCCGATCAACATCGACGGGACCATCACTCGCCGAGACGGACGCAACGGCGGAGCCGGAGGCGGGGGATACGCTGGCATCAGTGTGGCCAACGCTACCAATCCGATCATCATCTCCAACCACACCAACTATCCTGGCGTGGATGACGACGGCTCTGGAGTCAACAGTCCCGACTATGGCCTGAGCGCAACTGGCTCGACCTACGTCTTCCTGTCGTCCGGCTTCCTGCACGCAGAGGTGGACGGCTTCTTCGATGGAGGCGGAAACGCTCAGCTCCGTCGAGGGCCAAACGTTGGCGAGCGCACTGGCTCTACCGCCACTCCGACCGATGCCTTCTCTGAGCCGTGGACTGCGTACGGCAACATGGATGTCACTGGCTACTTCGTGACCAACTCCGGTCAGTCGAATGGTCAGTGGAACATCTTCAGCGGAGCGCCTGATGCGCTCCGTCTGGGGTCTGGCGGAGGTGGACTGTCCGTATCTGAGGGCGGTGCGGCACGCATGGGCGTAGCCACCCTAGTGGGTGGCACCGCAACGGTGGCCAACACCTCGATCGCTGCGAATGACAGGATCTTCCTGACATCCCAGGTTGACGGCGGAACGCCAGGCTTCCTTCGCGTGAGCGCAAGGACCGTGGGCACCAACTTCACCATCACCTCCAGCAGTGGAACTGACACATCGACCGTCGCATGGTTCATCGTGCGACCAGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
01ed52fc1da21f493cb2a6969ef208db73fce878442cdb77a14eda9da566ae3a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7697
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50