Protein

View in Explore
Genbank accession
QBX24051.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,80
Protein sequence
MSKEVASARIQHRGMSTQEWETSSDVLMEREIGIDTTTGYPKVGDGKRRFSELNDLRGPMGPQGPTGERGPIGPTGPIGKTGDTGPQGPPGPQGPKGADGKMTFEQLTEEQRKQLKGDKGDPGQRGADGQRGEAGPPGPKGDNGAPGPMGPRGERGPAGDPASLPHDVLRLRDLSSYVRKDALQYYLNNIGKLKDTKTGQFLDVMVVDNGQVPHDTSGMIVFERTGGK
Physico‐chemical
properties
protein length:228 AA
molecular weight: 24168,65010 Da
isoelectric point:6,85606
aromaticity:0,03947
hydropathy:-0,98202

Domains

Domains [InterPro]
SSF69349
STR
8–199
SSF69349
IPR041352
ATT
10–47
IPR041352 PTHR24637
IPR008160
STR
58–100
IPR008160 IPR008160
G3DSA:1.20.5.320
STR
73–116
G3DSA:1.20.5.320 G3DSA:1.20.5.320
QBX24051.1
1 228
Architecture
ATT
STR
ATT 8-47 | STR 48-199 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan172
[NCBI] 		2548021 No lineage information
Host Streptococcus dysgalactiae
[NCBI] 		1334 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX24051.1 [NCBI]
Genbank nucleotide accession
MK448860.1 [NCBI]
CDS location
range 30961 -> 31647
strand +
CDS
ATGTCAAAAGAAGTTGCATCAGCAAGGATACAGCATAGAGGCATGTCCACGCAAGAGTGGGAAACAAGTTCTGATGTTTTAATGGAGCGAGAAATTGGAATTGACACGACTACGGGTTACCCCAAAGTTGGTGATGGTAAACGCCGATTTAGTGAGCTAAACGACTTGCGTGGTCCTATGGGACCTCAAGGTCCTACAGGAGAAAGAGGCCCAATTGGTCCAACGGGTCCGATTGGCAAGACTGGCGATACAGGTCCGCAGGGTCCGCCCGGGCCACAAGGTCCTAAAGGTGCTGACGGTAAAATGACCTTTGAACAGCTCACGGAAGAGCAGCGGAAGCAACTAAAAGGTGATAAAGGGGACCCTGGTCAAAGAGGAGCAGATGGTCAGCGAGGAGAAGCAGGCCCTCCTGGTCCTAAAGGAGATAATGGTGCCCCTGGCCCAATGGGGCCAAGAGGTGAACGGGGACCAGCGGGAGATCCAGCATCTTTACCGCATGATGTTTTAAGGCTAAGGGATTTGTCTAGCTATGTTAGAAAAGACGCCCTCCAATATTATCTTAACAACATTGGCAAGCTAAAAGACACAAAAACAGGTCAATTTTTAGATGTGATGGTTGTTGATAACGGTCAAGTCCCTCATGACACCAGCGGCATGATTGTGTTTGAGAGGACTGGAGGCAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ea9bebf9043e336bd6bda2f477eb88c8ff255731195b486e7eefe169b5137d44
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7967
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank