Protein

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Genbank accession
AIM50829.1 [GenBank]
Protein name
long tail fiber assembly chaperone
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MAVVGIPGWIGTSAVAETGQRWMTAASRELRLGNPSWMSQFAGRSREIIHTLGADHNFNGQWFRDRCFEAGSAPIVFNITGNLVSYSKDVPLFFMYGDTPNEYVTLNIHGGVHMWGRGGNGTVNGNPGTNGGDVIQNDIGGRLRIWNYGVIASGGGGGGAVSLQNSWAPNATAGGGGGRPFGLGGGGVNWPGGNASYDARGGAGYTSQFGGGNGGDAGGRGGDGWGNHLSRSGGGAPGRAVFGSSPSWGATGTIYGSWI
Physico‐chemical
properties
protein length:259 AA
molecular weight: 26385,59750 Da
isoelectric point:8,88692
aromaticity:0,10811
hydropathy:-0,29846

Domains

Domains [InterPro]
IPR048291
ATT
1–42
IPR048291 IPR007932
DC_2135
STR
1–142
DC_2135
AIM50829.1
1 259
Architecture
ATT
STR
RBD
ATT 1-42 | STR 43-142 | RBD 143-259
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage Shf125875
[NCBI] 		1541825 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Mosigvirus
Host Shigella flexneri
[NCBI] 		623 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIM50829.1 [NCBI]
Genbank nucleotide accession
KM407600 [NCBI]
CDS location
range 159563 -> 160342
strand +
CDS
ATGGCAGTAGTAGGAATCCCTGGTTGGATTGGGACTTCAGCCGTTGCTGAAACGGGACAAAGATGGATGACGGCTGCTTCAAGGGAACTTCGTTTAGGAAACCCTTCATGGATGTCCCAATTCGCGGGCCGTTCAAGAGAAATAATTCACACACTTGGAGCAGACCATAACTTCAATGGTCAATGGTTCCGAGATAGATGTTTTGAGGCAGGTAGTGCACCTATAGTGTTTAATATCACCGGAAATTTGGTATCATATAGTAAAGATGTTCCATTATTCTTTATGTATGGCGATACGCCAAATGAATATGTTACTTTGAATATTCACGGTGGAGTTCATATGTGGGGACGAGGTGGTAACGGTACTGTAAACGGAAACCCAGGCACAAATGGCGGCGATGTAATCCAAAATGATATCGGCGGAAGACTTCGTATTTGGAACTATGGCGTTATTGCATCAGGCGGCGGCGGTGGTGGTGCGGTGTCATTACAGAATAGCTGGGCACCAAATGCTACAGCAGGTGGCGGTGGCGGCAGACCATTTGGCCTCGGCGGAGGCGGCGTTAATTGGCCTGGTGGTAATGCTAGTTATGACGCCCGGGGCGGCGCCGGTTACACTTCCCAATTCGGCGGTGGTAATGGCGGGGATGCTGGAGGTCGGGGCGGAGATGGATGGGGTAATCACTTATCTAGATCTGGCGGTGGTGCTCCTGGCAGAGCAGTATTCGGAAGTTCACCGTCATGGGGTGCTACAGGCACAATCTACGGCTCCTGGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5b94916d7f06e53f815f7c51dfdce3f72543f12e255bc3e4cd668b23c1020d85
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8385
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and development of bioluminescent reporter phages for bacterial dysentery Schofield,D.A., Wray,D.J. and Molineux,I.J. — — GenBank