Protein

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Genbank accession
WNM50534.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,72
Protein sequence
MINNQDLKLLLYDSELNIVDSTTNIVQDIGTVIISNLTPNTEYPYGSFFVSWVVNGQESNKFPVQSFNTKDNETSKILNVKSYYKDTNNDVDNNVDNDSTSNNVVINGKSAYDIALDNGFKGTEKEWLESLKGKPGTKGEPFTYNDFTQEQLDSLKGEKGDPFTYNDFTQEQLDSLKVHTSASGDIIVESPLSGLTGVFIGDSITEVNARTRKNYHQFIADRNNMKNINLGHSGTGFQDRYNSVAEIKEQPDFISVKMGTNDYGLVGGKTRPLGTAENLEMNTVARLIYYTFLQLSINYPTTPIVVLTPLPRKESNPFKETKNEVGYTLGELVEVLTKIAHKFSFPVLDLYNESNLRIWDDNVNGIFFSYDEDDPSKADGLHPNYKGHQLISYQIEDFLKSKAIVGEKIDYSSKVDTSLKTISKDKGVYSKTVKTYGIFWKKDQSMIFNIYNDEVDLTGMKVIRVDHKGKSILNASGIANNSPYFYTLPDYDDKDSGFNRTTQVTDFADSFELMDNFTTRGNIYMPDYITLYYTDIKNGNIVGDTNSTGFRDTSTQSSTPSTPQENNTTNNKVLYTANNDGTYNLDIPKEAVSKISWKKDQSFMIHINHEYTKDIDFGNSYIYDTEINGKKISVNYADAKYNVTNSGDYFYYLTVPSATDGTSNNRTSQVQEIVNTLTEKGVENGDRVLYEPVSIKLRLKKI
Physico‐chemical
properties
protein length:702 AA
molecular weight: 79183,78370 Da
isoelectric point:4,93393
aromaticity:0,10969
hydropathy:-0,61852

Domains

Domains [InterPro]
DC_1109
ATT
85–202
DC_1109 DC_0605
IPR051532
Unmapped
171–400
IPR051532
SSF52266
STR
188–401
SSF52266
IPR036514
STR
193–410
IPR036514
IPR036514
STR
193–400
IPR036514
cd00229
ENZ
198–398
cd00229
IPR013830
ENZ
199–390
IPR013830
WNM50534.1
1 702
Architecture
ATT
STR
RBD
ATT 85-202 | STR 203-410 | RBD 411-700 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage Alsa_1
[NCBI] 		3076561 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus sp.
[NCBI] 		29387 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNM50534.1 [NCBI]
Genbank nucleotide accession
OR354820 [NCBI]
CDS location
range 106755 -> 108863
strand -
CDS
TTGATTAATAATCAAGACTTAAAACTTTTACTTTATGATAGTGAACTTAATATTGTAGATTCAACTACTAATATTGTTCAGGATATAGGAACAGTAATAATAAGTAATCTCACACCAAATACTGAATATCCCTATGGTAGTTTTTTTGTTTCTTGGGTAGTTAATGGTCAAGAATCAAATAAGTTTCCTGTTCAATCATTTAATACTAAAGATAATGAAACTAGTAAAATATTAAATGTCAAATCTTATTATAAAGATACTAATAATGATGTAGATAACAATGTTGATAATGATTCAACAAGTAATAATGTAGTTATAAATGGTAAAAGTGCATATGACATAGCATTAGATAATGGCTTTAAAGGTACTGAAAAAGAATGGTTAGAAAGTCTAAAAGGTAAACCAGGTACTAAAGGAGAACCATTTACTTATAATGATTTCACTCAAGAACAATTAGATTCACTTAAAGGAGAAAAAGGTGACCCTTTTACTTATAATGATTTCACTCAAGAACAATTAGATTCACTTAAAGTACATACTAGTGCTAGTGGGGATATTATTGTGGAAAGTCCTTTAAGTGGTCTTACTGGAGTGTTTATTGGAGATAGTATAACAGAAGTTAATGCAAGAACTAGAAAAAACTACCACCAATTTATTGCTGATAGAAATAATATGAAAAATATAAACTTAGGACATAGTGGGACTGGATTCCAAGATAGATATAATTCTGTTGCAGAAATTAAAGAACAGCCTGATTTTATATCTGTAAAAATGGGTACGAATGATTATGGTCTAGTTGGTGGTAAAACTCGACCTTTAGGGACTGCTGAAAATTTAGAAATGAATACAGTTGCTAGACTTATATATTACACATTTTTACAACTATCAATCAATTATCCTACAACACCAATAGTAGTCTTAACACCTTTACCAAGAAAAGAGAGCAACCCTTTTAAAGAAACTAAAAACGAAGTAGGGTATACGTTAGGAGAACTAGTAGAAGTATTAACTAAAATTGCTCATAAATTCTCATTCCCCGTATTAGATTTATATAATGAATCAAATTTAAGAATTTGGGATGATAATGTTAATGGTATATTTTTCTCTTATGACGAAGATGACCCTAGTAAAGCTGATGGGTTACACCCTAATTACAAAGGACACCAACTAATTTCTTACCAAATAGAAGATTTTTTGAAATCTAAAGCTATTGTTGGAGAAAAGATTGATTATAGCAGTAAAGTAGATACTTCATTAAAAACTATTAGTAAAGATAAAGGTGTTTATTCTAAAACAGTTAAAACGTATGGTATTTTCTGGAAAAAAGACCAAAGTATGATATTTAATATCTATAATGATGAGGTAGATTTAACAGGTATGAAAGTTATAAGAGTAGACCATAAAGGTAAGTCTATTTTAAATGCTAGTGGAATAGCAAATAATTCTCCATATTTCTACACATTACCTGACTATGATGATAAAGATTCTGGATTTAATAGAACTACACAGGTAACAGACTTTGCTGATTCCTTTGAATTAATGGATAATTTTACAACTCGTGGAAATATTTATATGCCTGATTATATAACTTTGTATTACACAGATATTAAAAACGGTAACATTGTGGGGGATACTAATTCAACTGGCTTTAGAGATACTAGTACTCAAAGTTCAACACCAAGTACACCACAAGAAAATAACACAACTAATAACAAAGTTCTATACACAGCAAATAATGATGGGACATATAATTTAGATATACCAAAAGAGGCAGTTTCAAAAATTTCTTGGAAAAAAGACCAAAGTTTCATGATTCATATTAACCATGAATATACAAAAGATATTGATTTTGGTAATTCTTACATTTATGATACAGAAATAAATGGTAAGAAAATTTCTGTAAATTATGCTGATGCTAAATATAATGTAACTAACTCAGGTGATTATTTCTATTACCTTACAGTACCATCTGCTACTGATGGTACAAGCAATAATAGAACTTCTCAAGTTCAAGAAATTGTTAATACACTAACTGAAAAAGGTGTAGAGAATGGTGATAGAGTTCTTTATGAACCTGTATCAATTAAATTAAGATTAAAAAAGATTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b227ee85d1e9c94e76a7bf22dacb07cf3b71805450f2ee7b7a1afb2743550bd6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6551
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50