Protein

View in Explore
Genbank accession
QLF88125.1 [GenBank]
Protein name
tail collar protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MAKTKVSEWDSTAANNTDINSININEGCPPSTINNAIRETMAQIKNWQDGSSGDSWTSTGTITAAGTLAVTGGLTLDGATGTSGQVLVSSGSSATPTWGSGFPTGGIILWSGSTGSIPSGWALCNGSSGTPDLRDRFVVGAGSTYAVDATGGSADATLPSHTHTATTTVSTKTGLDGTLTLKNRGGSSYNSSLMAARSGSVTTVNQGNSVGYGEGWEGEGGSGSSKATLTLNHNHTATTSVSSAGLSATNANLPPYYALAYIMKL
Physico‐chemical
properties
protein length:265 AA
molecular weight: 26543,59550 Da
isoelectric point:5,45026
aromaticity:0,05660
hydropathy:-0,22717

Domains

Domains [InterPro]
DC_2164
STR
1–265
DC_2164
cd22641
STR
34–158
cd22641
SSF88874
STR
98–265
SSF88874
QLF88125.1
1 265
Architecture
STR
STR 1-265
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QLF88125.1
1 265
Domain Start End Length (AA) Confidence
N-terminal 1 41 41 0,7937
Central domain 42 240 200 0,0228
C-terminal 241 265 24 0,9979
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-41
Central
42-240
C-terminal
241-265

Taxonomy

  Name Taxonomy ID Lineage
Phage Methylophilales phage Venkman EXVC282S
[NCBI] 		2727865 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QLF88125.1 [NCBI]
Genbank nucleotide accession
MT375522.1 [NCBI]
CDS location
range 22385 -> 23182
strand -
CDS
ATGGCAAAGACTAAAGTATCAGAATGGGATAGTACAGCAGCTAACAATACTGACATAAACTCAATAAACATAAATGAGGGCTGCCCACCCAGTACCATTAATAATGCAATTCGTGAAACAATGGCACAAATCAAAAATTGGCAAGATGGTTCTAGTGGTGATAGTTGGACTAGCACTGGTACAATTACAGCAGCAGGTACATTAGCTGTTACTGGGGGTCTTACATTAGATGGTGCAACAGGAACATCAGGACAAGTTTTAGTTTCTAGTGGTTCATCAGCAACACCAACTTGGGGTAGTGGGTTTCCTACAGGTGGTATTATTTTATGGTCAGGTTCTACAGGTTCTATCCCTAGTGGTTGGGCATTGTGTAATGGCTCGTCAGGAACTCCTGATTTAAGAGATAGATTTGTAGTAGGTGCAGGTAGCACTTATGCAGTAGATGCAACAGGTGGTAGTGCAGATGCTACTTTACCATCTCATACTCACACAGCAACTACTACTGTAAGCACTAAAACAGGGTTAGATGGAACATTAACTTTAAAAAACAGAGGTGGTTCATCATATAACAGCTCATTAATGGCAGCTAGAAGTGGGTCAGTTACAACAGTCAATCAAGGTAATTCTGTAGGATATGGTGAGGGATGGGAAGGTGAGGGTGGTTCTGGTTCATCTAAAGCAACCCTTACACTAAATCACAACCATACAGCTACAACTTCTGTTTCTTCAGCAGGTTTAAGTGCAACTAACGCTAACCTACCTCCTTACTATGCTCTTGCATACATAATGAAACTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d68d40244da7d6359869aa7fed91dd5bd77736d343f0b1d088df2b4e08c43aaa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6927
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50