Protein

View in Explore
Genbank accession
XPO94579.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MFFRGKDNNLWSKRILNQGDLNTYRYDVIIIQDGFARNIPIQPYDTIDSDPIFYAVDVREDKNPTICNGKFFRENSTKLTNLFNIKKVDGMMIKDLYVYTDKNNVPKDMKADATFYFNFVTNLTLDNVYQMNTYSDAANAITHGYFLSVFNGFNIKLININAHDNDWGVIGCRCINTAFVDKSSINRFDIHTYGTHVTIRDSIISNKFCQIGDYYGDIVFDNCIFNKCSSPLVHEHTYNYMTKYNIYLKNCTINGSDNLVHYLYSHMDVAPIRVEQNKKYLPNIYIEGLTVNLLKDKVFKLILNNGNWKKSSLYEGIYGLENVVLKNLVINYDKDDSREYTYMNLQYEQIDLLSCPNIVIDNCVFGKVIKGSELKLINSNLNVETLRVQYTLLRPNTKGKFTIKNSLMALPTKEYCPYDFIVENSDIINVRTSSLEENKYNNYMFVNCNLHFNRYGNTLDEGYAGNYVNCKFLMYRDKPSIYFESILDNWETNIINCSTNKQDYGTILYNNPFIPYSVENSHIIKNEFKKTRLSKTTINGISYVLLEQDTPESIEKIPYDAYNYARFLREKSLPLNFQRVKISGEEDAKWVNKAVSVIIAGSTNDMPKTGSITGLTYYDWDKRKLFVWSGERWSNAGTGFESKFEVIGSTNSRPTDLSIDEKGFQYYDTILNKPIWWTGTNWVDATGATV
Physico‐chemical
properties
protein length:690 AA
molecular weight: 79969,60520 Da
isoelectric point:6,40691
aromaticity:0,13478
hydropathy:-0,40710

Domains

Domains [InterPro]
IPR011050
STR
26–268
IPR011050 IPR011050
IPR011050
STR
26–255
IPR011050 DC_0941
IPR012334
STR
63–391
IPR012334
XPO94579.1
1 690
Architecture
STR
STR 26-690
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPO94579.1
1 690
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,8192
Central domain 11 454 445 0,9842
C-terminal 455 690 235 0,5036
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-454
C-terminal
455-690

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteroides phage BF1-TP2
[NCBI] 		3385211 Viruses > unclassified bacterial viruses >
Host Bacteroides fragilis
[NCBI] 		817 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPO94579.1 [NCBI]
Genbank nucleotide accession
PQ571263.1 [NCBI]
CDS location
range 30574 -> 32646
strand -
CDS
TTGTTTTTTAGAGGAAAAGATAATAATTTATGGTCAAAGCGTATTTTAAATCAAGGTGATCTCAATACATATCGTTACGATGTAATTATTATTCAAGATGGATTTGCTAGAAATATTCCAATTCAACCATATGATACAATTGATTCTGATCCTATATTCTATGCGGTAGATGTACGTGAAGATAAAAATCCTACAATTTGTAACGGTAAATTCTTTAGAGAGAATAGCACAAAACTTACAAATTTGTTTAATATAAAGAAGGTAGATGGTATGATGATAAAAGATCTGTATGTATATACAGATAAGAATAACGTCCCAAAAGATATGAAAGCTGATGCTACTTTCTATTTTAATTTTGTGACTAATCTCACATTAGATAACGTATATCAAATGAATACTTATTCTGATGCTGCTAATGCAATAACCCATGGTTATTTTTTATCCGTATTTAATGGTTTTAATATAAAACTAATAAATATAAATGCCCACGATAATGATTGGGGTGTAATAGGTTGCAGATGTATAAATACTGCATTTGTGGATAAAAGTAGTATAAATAGGTTTGATATTCATACCTACGGTACGCATGTGACGATTAGAGACAGTATTATTTCTAACAAGTTTTGTCAAATAGGTGATTACTATGGTGATATTGTATTTGATAATTGCATATTCAACAAATGTTCATCTCCTTTAGTTCATGAACATACCTATAATTATATGACAAAATACAATATTTATTTGAAAAATTGTACTATAAACGGTTCTGATAATTTAGTTCATTATTTGTATTCTCACATGGATGTTGCTCCAATTCGAGTAGAACAAAATAAAAAATACTTGCCAAATATATATATTGAAGGATTAACTGTAAACCTTTTAAAAGACAAAGTATTTAAACTTATATTGAATAACGGAAATTGGAAAAAGAGTAGTTTATATGAAGGGATTTACGGATTAGAAAATGTGGTTCTTAAAAATTTAGTAATTAATTATGATAAGGACGATTCTAGAGAATACACTTACATGAATTTACAATATGAACAAATAGATCTATTGTCTTGTCCAAATATAGTTATAGATAATTGCGTTTTTGGAAAGGTTATAAAAGGGTCTGAGTTAAAATTAATTAATTCGAATCTTAATGTTGAAACATTAAGAGTGCAATATACTTTGTTACGTCCGAATACAAAAGGAAAATTTACAATAAAAAACTCGTTAATGGCGTTACCTACAAAAGAATATTGCCCATATGATTTTATTGTTGAAAATTCTGATATAATTAACGTGCGTACTTCTTCTTTGGAAGAAAATAAATATAATAATTATATGTTTGTTAATTGCAACTTACATTTCAATAGATATGGTAATACACTTGACGAGGGTTATGCGGGTAATTACGTTAACTGTAAATTTTTAATGTATAGAGATAAACCTAGTATTTATTTTGAAAGTATTTTAGACAATTGGGAAACTAATATAATTAATTGTAGCACTAATAAGCAAGATTATGGTACAATATTGTATAATAACCCTTTTATTCCATACTCAGTTGAAAATTCACATATAATAAAAAATGAATTTAAAAAAACACGCTTGTCTAAAACTACAATTAACGGTATTAGTTATGTCTTGTTAGAACAAGATACTCCAGAATCAATTGAAAAAATTCCTTATGATGCTTACAATTATGCTAGATTTTTAAGAGAAAAATCTCTCCCGCTTAACTTTCAAAGGGTAAAAATATCCGGTGAGGAAGATGCGAAATGGGTGAATAAAGCTGTAAGTGTAATTATTGCAGGATCTACAAATGATATGCCTAAAACTGGTAGTATTACAGGTCTTACTTATTATGATTGGGATAAAAGGAAATTGTTTGTGTGGTCTGGAGAGAGATGGAGTAATGCTGGAACTGGTTTTGAAAGTAAATTTGAAGTTATAGGTTCAACCAATTCAAGACCAACTGATTTAAGTATAGATGAAAAAGGGTTTCAATATTATGATACAATTTTAAACAAACCAATCTGGTGGACAGGCACGAACTGGGTCGATGCCACCGGAGCTACCGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
06952e44e1465291ac734642ac767d5ebb4bb4bb6a898fe3b14cc9c04e98a958
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5655
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50