Protein

View in Explore
Genbank accession
QPZ53261.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MPAKSQPGNGLSAEWDLGESQFKAGMDANLRFLSAAVQLVLERSDKILPTPPAEGMLAIAENGASIVGYKQGVWISVATPRNGWVGYDKLLGTHIHFDGSSWGRPPWIEDAPVDGRRYIRKDGAWLEDDYRISAFIPQITQANQQVASFIIPVPMSLPNDASDCVARCQLPPPEETALILRKNTTQIGTITFTPGETVGVIDITGTADVAFAKHDELNLFAPSPITGVPEGIRILFRLEM
Physico‐chemical
properties
protein length:240 AA
molecular weight: 26095,41820 Da
isoelectric point:4,90648
aromaticity:0,07917
hydropathy:-0,10708

Domains

Domains [InterPro]
SSF58046
ATT
105–127
SSF58046
G3DSA:6.20.230.10
ATT
107–127
G3DSA:6.20.230.10
DC_0122
RBD
111–240
DC_0122
QPZ53261.1
1 240
Architecture
ATT
RBD
ATT 105-127 | RBD 128-240
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage vB_AchrS_AchV4
[NCBI] 		2796514 Uroviricota > Caudoviricetes > Casjensviridae > Gediminasvirus AchV4 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPZ53261.1 [NCBI]
Genbank nucleotide accession
MW269554.1 [NCBI]
CDS location
range 23317 -> 24039
strand +
CDS
ATGCCTGCAAAATCTCAACCTGGTAACGGCCTGTCGGCTGAATGGGACCTTGGCGAGTCCCAGTTCAAGGCTGGCATGGACGCCAACCTGCGCTTCCTATCGGCCGCCGTGCAGCTCGTGCTGGAGCGCTCGGATAAAATTCTGCCGACACCGCCCGCCGAGGGCATGTTGGCGATCGCAGAGAACGGCGCCAGCATCGTCGGATACAAGCAGGGCGTCTGGATCAGCGTCGCCACCCCGCGCAACGGCTGGGTCGGCTACGACAAGCTGCTGGGCACGCACATCCATTTCGATGGTAGCTCCTGGGGCCGGCCGCCCTGGATCGAAGATGCACCTGTCGACGGTCGCCGATACATCCGCAAGGACGGCGCCTGGCTGGAGGACGACTATCGCATCAGCGCGTTCATTCCGCAGATCACGCAGGCCAATCAGCAGGTCGCATCGTTCATCATCCCGGTGCCCATGTCGTTACCCAACGATGCCAGCGACTGCGTGGCGCGCTGCCAGTTGCCGCCGCCCGAAGAGACGGCGCTGATCCTGCGCAAAAACACGACGCAGATCGGCACCATCACCTTCACGCCTGGCGAGACGGTGGGCGTCATCGACATCACCGGCACCGCCGACGTGGCGTTCGCCAAGCACGACGAGCTGAACCTGTTCGCCCCGTCGCCCATCACCGGAGTGCCCGAGGGCATCCGCATTCTGTTCCGCCTGGAAATGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
85f28b78b62374501b3f98492e50e98213a9a8a6e229e073946918be24af2d2a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9010
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Achromobacter phage vB_AchrS_AchV4 Kaliniene,L., Noreika,A. and Meskys,R. 2020-08-14 — GenBank