Protein

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Genbank accession
YP_009797812.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,79
TF
Evidence RBPdetect2
Probability 0,86
Protein sequence
MSYTFTEHTANGSQTTFPFRFAGRDKGYLKAADIIVEVKSEGGWSTVSGWTLTGTNQITFNVPPAEGTRLRIRRVVEKEEPYAEFDRGVTLDMKSLNNSFIHLLEISQEILDGFYPEGYFVKQDVSWGGHKITDLADGTEPNDAVNKGQLDDIDKKHTDWNNKQDIEIAELKAGMTSGIAHRTVPWYTIAQGGEQVIRPPYVFQDALVFLNGVLQHELIGAVSIQNSTITFAEPLVAGTEVYVLIGSRIATSEPNLQLELNFDLVEGQQVVKVGSAFKYIEVYLDGLLQPKLAYQVDGDIITFSERVPECRMTAKIITA
Physico‐chemical
properties
protein length:319 AA
molecular weight: 35484,60380 Da
isoelectric point:4,85345
aromaticity:0,09718
hydropathy:-0,20752

Domains

Domains [InterPro]
DC_0041
STR
1–309
DC_0041
IPR005604
ATT
3–113
IPR005604 IPR011049
G3DSA:6.10.250.2040
STR
132–183
G3DSA:6.10.250.2040
YP_009797812.1
1 319
Architecture
ATT
STR
ATT 1-113 | STR 114-309 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage vB_CroP_CrRp3
[NCBI] 		2079275 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Citrobacter rodentium
[NCBI] 		67825 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009797812.1 [NCBI]
Genbank nucleotide accession
NC_047920.1 [NCBI]
CDS location
range 14072 -> 15031
strand -
CDS
ATGAGTTATACATTCACTGAACATACAGCGAATGGCTCGCAAACTACCTTTCCCTTCAGGTTCGCTGGGAGGGATAAGGGTTATTTGAAGGCAGCCGATATTATCGTAGAGGTAAAGAGTGAAGGTGGTTGGAGCACGGTTAGTGGTTGGACACTGACTGGTACAAACCAGATTACCTTTAATGTACCACCAGCAGAAGGGACACGACTTCGTATTCGCAGAGTGGTAGAGAAAGAGGAGCCATATGCAGAGTTTGACCGAGGTGTTACTTTGGATATGAAGTCACTTAATAACTCCTTCATTCATCTTTTAGAAATCTCTCAAGAGATATTAGATGGTTTCTATCCAGAAGGTTACTTTGTCAAACAAGATGTATCTTGGGGCGGTCATAAGATTACTGATTTAGCTGATGGCACAGAGCCTAACGATGCCGTGAATAAAGGCCAGCTTGATGACATTGACAAGAAGCATACTGACTGGAATAACAAGCAAGACATTGAGATTGCTGAACTTAAGGCAGGCATGACTTCTGGTATTGCGCACAGGACTGTTCCGTGGTACACGATTGCTCAAGGAGGAGAGCAAGTAATTAGACCACCTTATGTGTTCCAAGACGCACTAGTCTTCTTAAATGGTGTGTTGCAACATGAACTTATTGGTGCAGTTTCTATACAGAACAGCACTATCACTTTTGCTGAACCACTTGTTGCAGGGACGGAAGTGTATGTACTTATTGGCAGTAGGATCGCTACCTCGGAACCTAATCTACAACTTGAGTTGAACTTTGACTTAGTAGAAGGTCAACAGGTAGTAAAGGTTGGCTCTGCATTTAAATACATTGAGGTTTATCTTGATGGATTATTACAACCTAAACTTGCTTATCAGGTAGACGGTGACATCATTACTTTCTCAGAGAGAGTACCAGAGTGCCGGATGACTGCTAAGATCATCACAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b005e579268c1893b137cf521386858341254d06f32d219e09120920c85b9fb8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8386
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Citrobacter rodentium phages Mizuno,C.M., Debarbieux,L. and Roach,D.R. 2008-04 — GenBank