Protein

View in Explore
Genbank accession
QDH46429.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,52
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MEQGLGQVLQGPARWQYIPDAWCQESIGRLSRKGPFGALNRYTLMNKERRFAMPQTAQSAVEEWFAAIGTAPDYKTMHFWAGSGQSTFDINFAGGYIAREHVKCFIREDATGRTVDVSLTFVTASRVTTTNPVPVGWTICIYRDTPKNAPLALFVDGAILNATNLDRNAKQSVFAVAELLDRFDATNSMAEEAILRSSEAMAAAQAAQAKATQAAADAATAQAAATSAQSSATAAAGSASNAAALAGTANTNSNHALDVANGIDGKATQAINTANAANSTANGIDAKATQAQTDAAQALATINNVASNVLLNDGSKPFYALKSKDQAPTPLSDGFSFYQWGSEFLAKWGNITTPIYRYAYNIFRFCVPIQVVNGSDSTKVYHEISGTSGTINNVGYHQISVALNQGTAPRFELHRNGSWATLQHIDSSGNHVLSTSNGAGSTTGTRALFPPDGRVLSNYALNSPFTYYGAAAFMGGERNPCGVGDLFRMISQSYNTGGTGGFTYSLDNYIGILRNGTTAADTAFVFGHTDGGSWTKYWRVHASGELYSPENANRWYIQPNGCFWGTGYGNKYIHEWASQSFAPISDARVKDITGPATKRALDIVEQFEFVEYDFKEEYKDDFGTEHIDIGVTVQQLMEINPVFGKAIATYRDDGSVLDETLSLHTVNLIALLLKSVAELNAEVNELKNARS
Physico‐chemical
properties
protein length:691 AA
molecular weight: 74361,64250 Da
isoelectric point:5,60145
aromaticity:0,10275
hydropathy:-0,24660

Domains

Domains [InterPro]
DC_1771
ATT
1–80
DC_1771 DC_1878
IPR005604
ATT
83–190
IPR005604 IPR030392
IPR030392
CHP
585–644
IPR030392 Coil
QDH46429.1
1 691
Architecture
ATT
STR
ATT 1-190 | STR 191-690 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDH46429.1
1 691
Domain Start End Length (AA) Confidence
N-terminal 1 311 311 0,8989
Central domain 312 510 200 0,2039
C-terminal 511 691 180 0,9848
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-311
Central
312-510
C-terminal
511-691

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage LAh5
[NCBI] 		2591029 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH46429.1 [NCBI]
Genbank nucleotide accession
MK838111.1 [NCBI]
CDS location
range 13374 -> 15449
strand +
CDS
GTGGAGCAAGGCTTGGGACAAGTCCTTCAAGGCCCTGCCCGGTGGCAATACATACCTGATGCTTGGTGTCAAGAAAGCATTGGAAGACTGAGCCGAAAAGGGCCCTTCGGGGCCCTGAATCGGTACACCTTAATGAACAAAGAACGGAGATTCGCTATGCCCCAGACCGCGCAGTCCGCCGTCGAAGAATGGTTCGCAGCCATCGGCACTGCACCTGACTACAAGACCATGCACTTTTGGGCTGGTTCGGGTCAGAGCACCTTCGACATCAATTTCGCTGGTGGGTACATTGCCCGCGAACATGTAAAATGTTTCATTCGCGAAGACGCCACCGGCCGCACAGTGGACGTATCGCTGACATTCGTGACAGCCTCTCGTGTCACAACCACGAACCCGGTTCCTGTCGGCTGGACCATCTGCATCTATAGGGACACCCCGAAGAACGCTCCACTGGCACTGTTCGTGGATGGCGCTATCCTGAACGCCACGAACCTCGACCGCAACGCTAAGCAGTCGGTGTTCGCCGTAGCCGAGCTGCTCGACAGGTTCGATGCTACAAACTCCATGGCTGAAGAGGCCATCCTGCGCTCGTCCGAGGCAATGGCTGCTGCACAGGCGGCACAGGCAAAGGCCACTCAGGCTGCTGCTGATGCTGCAACCGCACAGGCTGCTGCGACCTCTGCACAGTCCTCCGCGACTGCCGCCGCAGGCTCTGCAAGCAACGCTGCCGCTCTGGCCGGCACGGCCAACACCAACTCCAACCATGCGCTGGATGTGGCCAACGGCATCGACGGTAAGGCTACCCAAGCAATCAACACAGCCAACGCTGCAAACTCTACCGCCAATGGTATCGACGCCAAGGCTACTCAGGCACAGACTGATGCTGCACAAGCGCTGGCCACTATCAACAACGTGGCAAGCAACGTGCTTCTGAATGATGGCTCCAAGCCATTCTATGCACTGAAGTCGAAAGACCAAGCACCCACCCCACTGAGTGACGGTTTCTCCTTCTACCAGTGGGGCTCGGAATTCCTAGCCAAATGGGGCAACATCACAACCCCGATTTACCGGTATGCTTACAATATCTTCAGATTCTGCGTGCCTATTCAAGTTGTGAACGGGTCCGACTCGACTAAAGTGTATCACGAAATTAGTGGGACGTCTGGGACCATCAATAACGTAGGCTACCACCAGATTTCTGTTGCCCTGAACCAAGGGACAGCACCGAGATTTGAGCTACACCGCAATGGCTCGTGGGCTACATTGCAGCACATTGATAGTAGTGGTAATCACGTTCTATCAACCTCCAATGGTGCGGGCTCTACAACCGGCACACGCGCTCTGTTTCCACCAGATGGGCGTGTTCTTAGTAACTACGCACTGAACTCCCCCTTCACTTATTACGGTGCCGCAGCATTTATGGGTGGTGAGCGTAATCCTTGCGGTGTAGGGGACCTGTTCCGTATGATTTCGCAATCATACAATACAGGCGGTACTGGTGGTTTTACGTATTCCCTAGACAACTACATAGGGATTCTGCGTAACGGCACAACTGCTGCCGATACAGCGTTCGTATTCGGCCATACAGATGGCGGAAGCTGGACTAAGTATTGGCGTGTTCATGCATCCGGTGAACTTTATTCCCCGGAGAATGCCAACAGGTGGTACATTCAGCCCAATGGTTGCTTCTGGGGTACTGGCTACGGTAACAAGTACATCCATGAGTGGGCCTCCCAGAGCTTCGCACCAATCTCCGATGCTCGGGTGAAGGACATCACCGGCCCTGCAACCAAGCGAGCGCTGGATATCGTTGAGCAGTTCGAGTTCGTCGAGTACGACTTCAAGGAGGAGTACAAGGACGACTTCGGCACCGAGCACATCGACATCGGCGTGACCGTGCAGCAGCTGATGGAAATCAACCCGGTGTTCGGTAAAGCTATCGCTACCTACCGGGATGATGGCTCTGTTCTCGACGAGACGCTGAGCCTGCACACCGTAAACCTGATTGCCCTGCTGCTGAAGTCTGTGGCAGAGCTCAACGCTGAGGTGAATGAGCTGAAGAATGCTCGTTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
16d9405205db4160b36609fb5ad537d0d6d9180d3c9ed1399227646609a491ab
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6312
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel bacteriophages capable of disrupting biofilms from clinical strains of Aeromonas hydrophila with intrinsic antibiotic resistance Kabwe,M., Brown,T.L., Speirs,L., Ku,H., Leach,M., Chan,H.T., Petrovski,S., Lock,P. and Tucci,J. 2020-02-14 — GenBank