Protein

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Genbank accession
YP_012787118.1 [GenBank]
Protein name
long tail fiber
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,95
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MAIKTKIIVQQILSIDDTTTTASKYPKYTVLLGNSISSITAGELTAAVEASAASAAAAKDSEIAAKESELNAKDSENLAAIHAGSSEASATQSAASATEAERQANLSKQSADNSATSAEESKGFRDSAELAAQNAENSRRLAEQAKSAAQQAQLAAETAKAGAETAETNAEASATTAGEHAAAAKQSELNAKTSETNAAASEGEAANQAVNATTEADRAKAEADRASQVVDGKLDKVDISGFIKVYKTKAEADADVSSRVLGEKILVWNQTDSKYGWYKVAGTVETPVLELVEIEQKLVSINNVHADDAGNVQITLPGGNPSLWLGEVTWFPYDKDSGVGYPGVLPADGREVLRVDYPDTWEAIEAGLIPSVSEAEWQAGATLYFSTGNGSTTFRLPDMMQGQAFRAPTKGEEDAGVVKDQIPYITVINGVSPNDNGEVTLGNVVTKNAWDGTSGEVLLRGAFGLGGSGITLNEPDLVSFFKAMRAFGSGYYRNDTAIGGLPAYSAGFYSKTADTHSFICPQYSSGIVFIGTINDNQLDGENPAIHTNVLYGTANKPDLNNDTEGTLSVNKGGTGASTYEGVRSNFNIQGVFCVTSEESGDFNSISSPNSKLSLLIANSKVWGVQDTEGNIAPLLVERGGTGATNISQARKNLGIGESDIPIFKGVNLSLTNGANSGLLYLTNKNTEGVQRTYSSIYNELQSELSKTTIRSSNDVTGKTAFLQFDENGKLYTSSVEATGNIKTGSLNLNYGHTFTINSGEQNTLQISNYVAGIDTWCGYTKYNWYNDYAIAGLVRGGSTHVSDYRIEVYSPGVDAYSFQFFPQGKLRGASFNGRCTQGGWEMDLDENAHTIPFNARSIGNNNGGWVPIVSGGYATPSGYRIRAAFGAISPGTSGWGRGVIKLMGDNSYFRGFEFHPSGNLTTWANSPDNAWGTAFEFTKSPSSDRDLKKDIIYTDGKEAYDRVMQWLPTLFKYKGQTTQRYGFIAQDLMKVDPQYVKLVPGAPVFEDVIGLNEDGEEYVDRRIETGVEDDTLALDSNVMLVDLGAAVIYMNSQMEQQRKELEELKALVATLVNK
Physico‐chemical
properties
protein length:1074 AA
molecular weight: 114715,12850 Da
isoelectric point:4,72533
aromaticity:0,08380
hydropathy:-0,36750

Domains

Domains [InterPro]
DC_0608
ATT
1–550
DC_0608 IPR030392
Coil
Unmapped
125–155
Coil Coil DC_0195
IPR030392
CHP
943–997
IPR030392 Coil
YP_012787118.1
1 1074
Architecture
ATT
STR
ATT 1-550 | STR 551-1074
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_012787118.1
1 1074
Domain Start End Length (AA) Confidence
N-terminal 1 580 580 0,8746
Central domain 581 779 200 0,2870
C-terminal 780 1074 294 0,9160
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-580
Central
581-779
C-terminal
780-1074

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenS_UTK0009
[NCBI] 		3028908 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus UTK0009
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_012787118.1 [NCBI]
Genbank nucleotide accession
NC_111487.1 [NCBI]
CDS location
range 86547 -> 89771
strand -
CDS
ATGGCAATTAAAACAAAAATTATTGTACAGCAGATTCTAAGTATAGATGATACTACAACTACTGCTAGTAAGTATCCTAAATATACAGTACTTTTAGGTAATTCTATTAGTTCAATTACTGCTGGTGAATTAACTGCGGCTGTGGAGGCATCCGCAGCCTCTGCTGCAGCAGCTAAGGACTCAGAAATTGCTGCTAAAGAATCAGAATTGAATGCTAAAGACTCTGAAAACTTAGCTGCTATTCATGCTGGTTCTTCTGAAGCTTCTGCAACCCAATCTGCTGCATCTGCTACAGAAGCAGAAAGACAAGCTAATCTATCTAAGCAGAGTGCTGATAACTCTGCCACATCTGCCGAAGAATCTAAAGGATTTAGAGATTCCGCTGAATTAGCTGCTCAAAATGCTGAAAATAGTCGTAGACTGGCTGAACAGGCTAAATCTGCTGCTCAACAAGCTCAGCTTGCCGCTGAAACAGCTAAGGCTGGAGCGGAGACTGCAGAAACTAACGCAGAAGCTTCTGCTACAACTGCAGGAGAACACGCTGCTGCTGCCAAGCAGTCTGAATTAAATGCTAAGACTTCTGAAACTAATGCTGCTGCATCTGAGGGAGAAGCTGCTAATCAGGCAGTTAATGCTACTACAGAAGCAGACCGTGCAAAAGCGGAAGCCGATCGTGCTTCACAGGTTGTTGATGGGAAACTTGATAAAGTAGATATTTCTGGATTTATCAAAGTATATAAGACAAAAGCTGAAGCTGATGCTGATGTATCTAGTCGTGTACTAGGTGAGAAGATTTTAGTATGGAATCAAACAGATTCTAAATATGGGTGGTATAAAGTCGCCGGGACTGTAGAAACTCCAGTTCTAGAACTAGTAGAGATAGAACAGAAATTAGTCTCTATCAATAACGTTCATGCTGATGATGCTGGTAACGTGCAGATTACACTTCCGGGTGGTAACCCTTCTTTATGGTTAGGTGAGGTTACTTGGTTCCCTTATGATAAAGATTCTGGTGTTGGATATCCTGGTGTTCTACCTGCTGATGGTCGTGAGGTGCTTCGAGTAGACTATCCAGATACTTGGGAAGCTATCGAAGCAGGATTAATTCCTTCTGTATCAGAAGCTGAATGGCAAGCTGGTGCAACACTTTACTTCTCTACTGGTAATGGTTCTACGACGTTCCGTTTACCAGATATGATGCAAGGTCAGGCTTTCCGTGCACCAACTAAGGGTGAAGAAGACGCCGGAGTAGTTAAGGATCAGATTCCTTATATTACCGTAATCAATGGGGTTTCTCCTAATGATAATGGTGAGGTAACTCTTGGTAATGTTGTTACTAAGAATGCTTGGGATGGCACTTCTGGTGAAGTTCTTCTACGAGGTGCTTTCGGTTTAGGAGGTTCTGGTATTACCCTTAATGAACCTGATTTAGTCTCCTTCTTTAAAGCTATGCGCGCTTTTGGTTCTGGTTACTACAGAAATGATACAGCTATTGGTGGCTTACCTGCATATTCTGCTGGTTTCTACTCTAAAACCGCAGACACACATTCATTCATTTGCCCACAATATTCTAGTGGTATTGTTTTTATAGGTACTATTAATGATAATCAGTTAGACGGAGAAAATCCTGCTATCCATACTAACGTATTATACGGTACTGCTAATAAACCTGATCTTAATAATGACACAGAAGGAACTCTATCAGTCAATAAAGGAGGTACGGGAGCTAGCACGTATGAGGGGGTCCGTAGTAACTTTAATATTCAGGGAGTTTTTTGTGTTACAAGTGAGGAAAGCGGGGATTTTAATTCTATATCATCTCCAAATAGCAAATTAAGCTTACTAATAGCAAATAGTAAAGTTTGGGGGGTACAAGATACCGAGGGTAATATTGCGCCCTTACTTGTAGAAAGAGGTGGTACTGGTGCAACAAATATAAGTCAGGCAAGGAAAAATCTTGGAATTGGTGAAAGTGATATTCCTATATTCAAAGGTGTAAATCTTAGCCTAACTAATGGGGCCAACTCTGGACTTCTATACCTAACAAATAAGAATACAGAAGGTGTGCAACGTACATATTCTAGTATTTATAATGAACTTCAATCTGAGCTAAGTAAGACGACAATACGTAGTAGTAATGATGTGACGGGTAAAACAGCTTTCCTACAATTTGATGAAAATGGTAAATTATACACATCTAGTGTTGAGGCTACTGGAAATATCAAAACAGGAAGTTTAAATTTAAACTATGGCCATACATTTACAATTAATTCTGGTGAGCAAAATACACTACAAATCTCTAACTACGTTGCTGGAATAGACACCTGGTGTGGATATACTAAGTATAACTGGTATAATGATTACGCTATTGCTGGACTTGTTCGTGGCGGATCCACCCATGTATCTGATTATAGGATTGAGGTTTATAGTCCTGGTGTTGATGCGTATAGTTTTCAATTCTTCCCACAAGGTAAGTTGAGAGGGGCATCTTTTAATGGAAGATGTACTCAAGGAGGATGGGAGATGGATCTAGATGAAAATGCTCATACTATACCATTTAATGCTAGAAGTATTGGTAATAATAACGGAGGTTGGGTCCCGATTGTATCAGGAGGTTATGCAACTCCATCAGGTTATAGGATTCGTGCGGCATTTGGTGCTATTTCTCCTGGGACTAGTGGATGGGGACGTGGCGTTATAAAACTCATGGGCGATAATAGTTACTTTAGAGGGTTTGAGTTTCATCCTAGTGGTAATTTAACTACATGGGCCAATTCTCCTGATAATGCTTGGGGTACCGCATTTGAGTTTACTAAGTCACCCTCATCAGACCGTGATCTGAAAAAAGATATTATCTATACTGATGGGAAGGAAGCATATGATCGCGTTATGCAATGGTTGCCAACTTTATTTAAGTATAAAGGACAGACAACACAACGCTATGGGTTTATAGCTCAAGACTTGATGAAGGTTGACCCCCAGTATGTTAAATTAGTTCCTGGTGCACCTGTATTTGAAGACGTAATAGGGCTTAATGAAGATGGAGAAGAATACGTCGATCGTAGGATTGAAACGGGTGTTGAAGATGATACTCTAGCGCTAGATAGTAACGTTATGCTTGTTGATTTAGGGGCTGCTGTTATTTATATGAACAGTCAGATGGAACAACAACGAAAAGAGTTGGAAGAGTTAAAGGCTCTAGTAGCTACTCTAGTTAACAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f7b1f1f4a98d9598f9553937d2481223e84508947307fb0d5e5f14eb143a2307
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5793
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a Diverse Collection of Salmonella Phages Isolated from Tennessee Wastewater Bryan,D.W., Hudson,L.K., Wang,J. and Denes,T.G. — — GenBank