Protein

View in Explore
Genbank accession
AFV51346.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MNLSVAIGAAIVRGHFYNNDSIATLTIAAADTAARTDRVVLRLDPAANSIVLAVIKGTAGGGTPALTQTDTGIYELCLANIAVGPSVTSISAASVTDQRRWVGSRIGSWSTALRPTTPRVGRMGFNTDVLAWEFWNGSAWTDLAPTVDWNTIQGKPATFAPSTHSHTVAWADITGKPSSFNPSAHLTSWDEIVNEPATFPPSTHSHSWSSITSKPTTFAPSTHYHSQYLESGDTISWANGSKKPHANSASGAGPWYAVWVEADGTFCRNTSSIKFKENVRDKELDPADVLALRPVVYDRKPKDGETDARKDEFGLIAEEVAETLPEIVNYLDGEVDGLRYDLLGVALLAVVKDQQARIEKLEKLVEGLAS
Physico‐chemical
properties
protein length:370 AA
molecular weight: 39818,97610 Da
isoelectric point:5,39541
aromaticity:0,08108
hydropathy:-0,21081

Domains

Domains [InterPro]
DC_1002
STR
1–284
DC_1002
DC_0203
RBD
260–370
DC_0203
IPR030392
CHP
271–328
IPR030392
IPR030392
CHP
271–365
IPR030392
AFV51346.1
1 370
Architecture
STR
RBD
STR 1-284 | RBD 285-370
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptomyces phage phiCAM
[NCBI] 		1239386 Uroviricota > Caudoviricetes > Arquatrovirinae > Camvirus CAM >
Host Streptomyces coelicolor
[NCBI] 		1902 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Kitasatosporales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFV51346.1 [NCBI]
Genbank nucleotide accession
JX889246 [NCBI]
CDS location
range 23149 -> 24261
strand +
CDS
ATGAACCTGTCCGTCGCGATCGGTGCAGCCATCGTGCGCGGCCACTTCTACAACAACGACTCGATCGCAACGCTGACCATTGCGGCTGCCGACACGGCGGCTCGAACCGACCGCGTCGTCCTGCGCCTCGACCCGGCTGCGAACAGCATCGTCCTGGCCGTCATCAAGGGCACGGCTGGCGGCGGCACTCCCGCCCTGACCCAGACCGACACCGGCATCTACGAGCTGTGCCTGGCGAACATCGCGGTCGGCCCGAGCGTCACCTCGATCTCGGCTGCATCCGTCACCGACCAGCGTCGGTGGGTGGGCTCGCGCATCGGTTCCTGGAGCACGGCGCTTCGCCCCACCACCCCCCGCGTCGGACGCATGGGCTTCAACACCGACGTCCTCGCCTGGGAGTTCTGGAACGGCAGTGCGTGGACCGACCTCGCCCCGACCGTCGACTGGAACACGATCCAGGGCAAGCCTGCGACGTTCGCCCCGAGCACCCACTCTCACACCGTGGCGTGGGCCGACATCACCGGCAAGCCGTCCTCGTTCAACCCTTCCGCCCACCTCACGTCGTGGGACGAGATCGTCAACGAGCCCGCTACGTTCCCGCCGTCGACTCACTCGCACTCCTGGTCCTCGATCACCTCGAAGCCGACGACGTTCGCCCCGAGCACGCACTACCACTCCCAGTACCTGGAGTCTGGCGACACGATCTCCTGGGCCAACGGCTCGAAGAAGCCTCACGCCAACTCCGCCTCCGGTGCCGGTCCCTGGTACGCGGTGTGGGTCGAGGCTGACGGCACCTTCTGCCGGAACACCTCCTCGATCAAGTTCAAGGAGAACGTCCGAGACAAGGAGCTCGACCCGGCTGACGTGCTCGCGCTGCGCCCGGTGGTCTACGACCGCAAGCCGAAGGACGGCGAGACCGACGCCCGCAAGGACGAGTTCGGCCTGATCGCGGAGGAGGTCGCTGAGACCCTGCCCGAGATCGTCAACTACCTCGACGGCGAGGTGGATGGACTGCGCTACGACCTGCTCGGCGTCGCTCTCCTTGCCGTCGTCAAGGACCAGCAGGCTCGCATCGAGAAGCTGGAGAAGCTGGTCGAAGGGCTGGCTTCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f3b4bdeca418fa65f61b014e0815bd77bed4c6b1121ee3682ee62d07a8b19bc4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7835
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequence of a New Streptomyces coelicolor Generalized Transducing Bacteriophage, PhiCAM Monson,R. and Salmond,G.P. 2012 23166260 GenBank