Protein

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Genbank accession
YP_008431176.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MALNFTPITENSTIADLTKQVNNIGSVLTEDRNIFEVTTDLQLDVSKAQKVKLTTDRGLAKDIDYTNYLRDIKKVGLYYIGARTLATMYDKPDMENIDVLLQVLTLDTEDRVIQILYTLSTEDSKSKVMHRFVTNYQTSQWQVVQSLPNNKYTSHIGGSPFDINTQGTYYVSNMSDMPSGVYEGFLQVSIDSNDNRMLRLTDSNTGKEYLNVKKSYDNWGDWRTDLDVQKISKYLVSNVNGDAENNNYSLSVYTSDNITFQQAIAKHIEETSKTVFTFYIQGGVSGSPSTVSCRGIFISDSNNYTNLYGVYTAIGTDGRTINGSVNGNTWNTTKTLPGFKELWNGAHNFKDTNKKETMSDSISNYQYVEIYTRYRALQNTKGTDKTGTLCHKFYIDGDGIYTCSGAYVSGDSNIGVEYYRVTLSITGDTWTIKDSAVNNNKDQYVTRVVGISLP
Physico‐chemical
properties
protein length:454 AA
molecular weight: 51032,07780 Da
isoelectric point:5,29026
aromaticity:0,10573
hydropathy:-0,50771

Domains

Domains [InterPro]
DC_1773
STR
10–255
DC_1773 IPR057110
DC_0448
STR
194–453
DC_0448
YP_008431176.1
1 454
Architecture
STR
STR 10-454
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_008431176.1
1 454
Domain Start End Length (AA) Confidence
N-terminal 1 322 322 0,6874
Central domain 323 443 122 0,0182
C-terminal 444 454 10 0,9951
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-322
Central
323-443
C-terminal
444-454

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_SauM_Remus
[NCBI] 		1235659 Uroviricota > Caudoviricetes > Herelleviridae > Silviavirus > Silviavirus remus
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008431176.1 [NCBI]
Genbank nucleotide accession
NC_022090.1 [NCBI]
CDS location
range 48249 -> 49613
strand +
CDS
ATGGCACTAAATTTTACACCTATTACGGAAAACAGTACAATAGCAGACCTAACAAAACAAGTTAATAACATAGGTAGTGTATTAACTGAGGATAGAAATATCTTTGAAGTAACTACAGACTTACAATTAGACGTAAGTAAAGCACAGAAAGTTAAGTTAACAACGGATAGAGGATTAGCTAAAGATATAGATTATACCAATTACTTAAGAGACATTAAAAAAGTAGGTTTATATTACATAGGAGCACGTACATTGGCTACTATGTATGATAAACCAGATATGGAAAATATAGATGTATTACTGCAAGTATTAACATTAGATACTGAGGATAGAGTAATACAAATATTGTATACATTGTCAACGGAGGACAGTAAATCAAAAGTGATGCACCGATTCGTTACTAACTACCAAACATCACAATGGCAAGTAGTACAAAGTTTACCTAATAATAAATATACATCACATATAGGTGGAAGTCCTTTTGATATTAATACACAAGGTACATATTACGTGTCTAATATGTCGGATATGCCTAGTGGTGTTTATGAAGGATTCTTACAAGTTTCCATAGACAGTAATGATAATAGAATGTTAAGATTAACGGATAGTAACACGGGAAAAGAATATCTTAATGTTAAGAAATCGTATGACAATTGGGGTGATTGGAGAACTGATTTAGACGTACAAAAGATAAGCAAGTATCTTGTATCTAATGTAAATGGAGATGCGGAAAACAATAATTACTCATTATCCGTATATACATCAGACAATATAACATTCCAACAAGCTATAGCTAAACATATTGAAGAAACAAGTAAAACTGTTTTTACTTTCTATATACAAGGTGGTGTTTCAGGCTCTCCGTCTACGGTTAGTTGCAGAGGTATATTTATATCAGACTCAAACAACTATACTAATTTATATGGTGTATATACCGCAATAGGTACTGACGGTAGAACTATTAATGGTTCCGTAAATGGTAATACATGGAACACAACAAAAACATTACCTGGTTTTAAAGAACTATGGAATGGAGCACATAACTTTAAAGATACAAATAAAAAAGAAACTATGTCTGATTCTATATCTAACTACCAATACGTAGAGATATACACAAGATACAGAGCCTTACAAAACACAAAAGGTACGGATAAAACAGGTACTTTATGTCATAAGTTTTATATAGATGGAGATGGTATTTACACATGTTCAGGAGCTTATGTATCAGGAGACTCTAATATTGGAGTAGAGTACTATCGAGTAACTTTATCTATTACTGGTGATACATGGACAATTAAAGATAGTGCAGTAAATAATAATAAAGACCAATATGTTACACGTGTTGTAGGTATCTCTTTACCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
d010cfb010217435789afe6def976af9faef2c48e8a68fd9df71b381f9785f45
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8041
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50