Protein

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Genbank accession
AWD90623.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MFDPVTGSGYSYSLRTGDGITNLFTFGFTGPGVGYLSADDIHVFVDGNEVDNTINRADPNRVILESVPALGTTVLIRRVQPLDKTYSDFERGNVYNKDQINYSFLNQLYIAHQFLDGFFDGGDNDDGEEVATGNLNMRGFKIYNLAKNTNDPHEAARLDRVFAVEDRLSGLENSLSDLRLTSIPWSPPVAVQGQTRFTSPYGVVNPVVWLNGVLQDPLKGDFTIDKPASQIVLAEPADAGDRVFALMGDPIADMRAYSMSSYARVWWPANGFRPSLTDGSTIVTHRPVGRIESPAHVFFSDKVRSCMAVVITPPDMPVAEGVEMRFMVTGENAGNTRWRIETVLQAEGAFQPAYTNPNEYTIAVRPQDITHMRVVYPMPAADIGQTLYIRVSRVPTHPEDTLATSNEDALFLGIALNYVAE
Physico‐chemical
properties
protein length:421 AA
molecular weight: 46459,57900 Da
isoelectric point:4,74710
aromaticity:0,09976
hydropathy:-0,21069

Domains

Domains [InterPro]
DC_0041
STR
1–411
DC_0041
IPR005604
ATT
9–117
IPR005604
AWD90623.1
1 421
Architecture
ATT
STR
ATT 1-117 | STR 118-411 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AWD90623.1
1 421
Domain Start End Length (AA) Confidence
N-terminal 1 316 316 0,8107
Central domain 317 410 95 0,0435
C-terminal 411 421 10 0,9965
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-316
Central
317-410
C-terminal
411-421

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Njord
[NCBI] 		2163985 Uroviricota > Caudoviricetes > Autographivirales > Colwellvirinae > Njordvirus
Host Pseudomonas syringae pv. avii
[NCBI] 		663959 Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas syringae

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
dd4c8d0541a7916dcaf426d4ab43941d57451de577bc1e97c639ae1bcbe605c4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7340
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50