Protein

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Genbank accession
XDJ14826.1 [GenBank]
Protein name
lytic transglycosylase
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAVLRKGDSGPSVLTLQKALVAKGYKLVPDGKFGQATHNNLAAFQGANGLAADGLAGPRTLAALGIESKSILDEIPMPRANRDRAAAMVTLEAISKITGVDAKLLATFASIESGFDYTAKASTSSATGWFQFLDATWDDMLAQTSGKYGLGAFDDSKRTLRKDPRANGLMGAEFLKGNDRVLTKALGRPATDTELYAAHFFGAGTAAKFLTMDRNAIGAEHFPRQAAANVGIFYQRDKKTPLTIGEIFKLLDSKVAAHRK
Physico‐chemical
properties
protein length:260 AA
molecular weight: 27684,30400 Da
isoelectric point:9,58550
aromaticity:0,08077
hydropathy:-0,16192

Domains

Domains [InterPro]
IPR036366
ATT
1–65
IPR036366 G3DSA:1.10.530.10
IPR036365
RBD
3–65
IPR036365 IPR023346
IPR002477
CBM
9–64
IPR002477 IPR008258
XDJ14826.1
1 260
Architecture
ATT
RBD
STR
RBD
ATT 1-65 | RBD 76-91 | STR 92-216 | RBD 217-260
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage RVTF4
[NCBI] 		3236931 No lineage information
Host Pseudomonas sp.
[NCBI] 		306 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDJ14826.1 [NCBI]
Genbank nucleotide accession
PQ015378 [NCBI]
CDS location
range 214980 -> 215762
strand +
CDS
GTGGCTGTACTACGCAAAGGGGATAGCGGACCTTCCGTTCTCACCCTGCAAAAAGCACTCGTAGCCAAAGGCTACAAACTGGTACCGGACGGGAAGTTCGGTCAAGCTACTCACAACAACCTGGCTGCCTTCCAAGGAGCTAACGGACTGGCTGCTGATGGCTTAGCTGGCCCTCGTACTCTCGCTGCCCTGGGTATCGAATCGAAGTCTATTCTTGACGAGATCCCAATGCCACGAGCTAACCGTGACCGTGCTGCAGCCATGGTAACTCTGGAAGCTATCTCGAAGATCACTGGTGTCGATGCTAAACTGCTCGCTACCTTTGCATCGATCGAATCGGGCTTCGACTACACTGCCAAGGCGTCTACGTCCAGCGCTACTGGCTGGTTCCAATTCCTGGATGCTACCTGGGATGACATGCTGGCACAGACCTCCGGTAAATACGGTCTCGGTGCTTTCGATGATTCGAAACGTACTCTCCGTAAAGACCCCCGTGCGAATGGCCTGATGGGAGCAGAGTTCCTGAAAGGGAATGACCGTGTCCTTACCAAAGCTCTGGGTCGTCCAGCTACTGATACTGAGCTCTACGCAGCTCACTTCTTCGGTGCTGGTACCGCGGCCAAGTTCCTAACCATGGATCGCAATGCAATTGGCGCGGAGCATTTCCCTCGCCAGGCTGCTGCGAATGTAGGTATCTTCTACCAGCGTGACAAGAAGACCCCGCTCACGATCGGTGAGATCTTCAAACTGCTTGACTCTAAGGTTGCTGCTCACCGCAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
74fa04e5a0862072dca8429ffa1099d4dbaa550ec9763e551e1c3e81df6fb988
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9498
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50