Protein

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Genbank accession
XLY82035.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MALTKLVAVQSPTGNQRDCANIAALRAFTCSHVGQEVTLREHTSGQGSGGGVWYCHALTAGSAVDDNGCQIINNAGQVLRRRDLKELTSSYFGLKAGDIIDPVLDNMYKASRTFNIYEAKIENPGFDKGYLLTGGKRYYCGDKPFYILSYSIGTLRGPNIWHTGDNVGITFSRFKTDGTSEQAWSGGGIRGFRIWGAASYLVQGNEGVNATPVRLSDMWQGEACDLWVTGYTSNTNGAVVSLYNEYAWTEGTIVENIMVRQSLRGLTFLRNHGTTATDSFFRVVADISFNAGVSGKATQVMVVGDGTAAGACLVYGHDIKLTQWMSAGSWHDIVRLEDYSIIAETGVIKIVADGYGISKTTVPSTEVVHSINVRGLNARFRSRVENWSNQAGGWGLDFLNIIFQSSMYTNAMTFYESDFDALPTINPVGMKIRYNGTFTVAERQSGKVYTLKGLIPGTTLKVKLTSRNGDDLNDAVVQEWKVFVRSTNLPCIVVPMSGSANIATTDGLAVTNISPVQTATFLKTVTPTQARNFIGQNYGLTVKNANDDNSLSYAVNSGRKIRFILPANPGATTTSPYSVEIEVL
Physico‐chemical
properties
protein length:584 AA
molecular weight: 63406,72340 Da
isoelectric point:7,99990
aromaticity:0,09760
hydropathy:-0,12894

Domains

Domains [InterPro]
DC_0717
ATT
2–110
DC_0717
IPR059934
RBD
19–81
IPR059934 DC_0250
XLY82035.1
1 584
Architecture
ATT
STR
ATT 2-110 | STR 111-584
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLY82035.1
1 584
Domain Start End Length (AA) Confidence
N-terminal 1 100 100 0,9882
Central domain 101 408 309 0,9810
C-terminal 409 584 175 0,9836
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-100
Central
101-408
C-terminal
409-584

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpP_AttikonH4
[NCBI] 		3243731 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLY82035.1 [NCBI]
Genbank nucleotide accession
PP978611.1 [NCBI]
CDS location
range 42555 -> 44309
strand +
CDS
ATGGCATTAACTAAATTAGTAGCGGTGCAATCTCCTACTGGGAACCAGAGGGACTGTGCCAACATCGCAGCCCTGCGTGCCTTCACGTGCAGCCATGTAGGGCAGGAAGTAACCTTACGAGAGCATACATCTGGGCAAGGTTCCGGAGGGGGCGTATGGTACTGCCATGCACTGACAGCAGGGTCTGCTGTAGACGATAACGGCTGCCAGATTATCAATAACGCTGGGCAGGTACTGCGCCGGAGAGACTTGAAAGAGTTGACTTCCAGTTACTTCGGACTCAAAGCCGGTGATATTATTGACCCGGTTCTAGATAATATGTATAAGGCATCACGTACATTCAACATCTACGAGGCCAAGATAGAGAACCCTGGATTTGATAAGGGGTACCTGCTTACTGGGGGTAAGCGCTACTACTGTGGCGACAAGCCTTTTTATATCCTGTCCTATTCTATTGGCACCTTGAGGGGGCCAAATATATGGCATACAGGCGACAACGTAGGCATCACCTTTTCCCGGTTTAAGACAGACGGAACGTCAGAGCAGGCCTGGTCCGGTGGAGGTATCCGCGGGTTCCGCATCTGGGGTGCTGCTTCTTACCTAGTACAAGGTAATGAGGGTGTGAACGCCACACCAGTTCGCCTGTCTGATATGTGGCAAGGTGAGGCTTGTGACTTGTGGGTTACTGGGTATACGAGTAACACCAACGGGGCTGTTGTATCCCTATACAATGAGTACGCGTGGACAGAGGGGACTATTGTAGAGAATATAATGGTCCGTCAGTCACTGCGGGGGTTAACTTTCCTGCGTAACCACGGGACTACTGCAACTGACAGCTTCTTCCGGGTGGTTGCGGATATCTCATTTAATGCCGGTGTATCCGGTAAGGCTACGCAAGTGATGGTTGTTGGTGATGGTACCGCTGCCGGTGCGTGTCTTGTATACGGCCACGACATCAAGCTCACGCAGTGGATGAGCGCTGGGTCATGGCACGATATCGTAAGACTTGAAGACTATAGCATCATCGCGGAAACCGGTGTAATTAAGATAGTTGCTGATGGTTACGGCATCTCCAAGACCACTGTTCCCTCTACCGAAGTTGTTCACTCTATCAACGTCCGTGGACTTAATGCGCGGTTCAGAAGCAGAGTGGAAAACTGGTCAAATCAGGCCGGTGGTTGGGGTCTGGATTTCCTGAACATCATATTCCAGTCCAGCATGTACACCAACGCTATGACTTTCTATGAGTCTGATTTTGACGCGCTACCAACCATCAATCCTGTGGGGATGAAGATACGGTACAACGGTACATTTACTGTTGCAGAGCGTCAGTCTGGTAAGGTCTACACCCTTAAAGGGTTGATTCCAGGAACGACTCTAAAGGTTAAGCTAACTTCCCGCAATGGAGATGACCTGAACGATGCGGTTGTACAGGAATGGAAGGTGTTCGTCCGAAGCACTAATCTACCGTGTATTGTCGTACCCATGTCCGGAAGTGCTAATATTGCAACTACTGATGGGTTGGCTGTTACCAACATAAGTCCAGTACAGACAGCGACGTTTCTTAAAACAGTGACCCCGACTCAGGCCAGGAACTTCATTGGTCAGAACTATGGGCTTACTGTGAAGAATGCTAATGACGATAATAGTCTGTCCTATGCAGTTAACTCAGGTCGTAAGATTCGCTTTATTCTTCCAGCTAACCCTGGGGCGACTACGACATCCCCGTACTCTGTTGAGATAGAGGTACTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f1149b60fc9efb1d68aed980538577b52c65fd7b36c607b09da3fd4b010ec0e9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6934
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of lytic bacteriophages against carbapenemase-producing K. pneumoniae clinical isolates Paranos,P., Siopi,M., Skliros,D., Zrelovs,N., Svanberga,K., Kazaks,A., Flemetakis,E. and Meletiadis,J. 2024-12-22 — GenBank