Protein

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Genbank accession
YP_010670771.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MPFIHKDHFPLNVSMGKVRGARYIHKFGAVPSMSQNTEGSVWDVNDTLYPWSTFSTPAVASVLAVDPLDDGKTIEIEGLDENFDVVKEDIVLSSSGAATGTQVFARIYRAYVKVGTTNEANIDIQVNATTVARISAGIGQTLMSVLTIPAGHTGYMFKGICTAETGADGSGFMLARYAGTDTFRVGHTFEVNGSGGEYQYETSFPFPFPEMTDIDVRIKTRTNNGRYTAAYDILVIKNDF
Physico‐chemical
properties
protein length:240 AA
molecular weight: 26124,03800 Da
isoelectric point:5,06909
aromaticity:0,10833
hydropathy:-0,10917

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010670771.1
1 240
Domain Start End Length (AA) Confidence
N-terminal 1 53 53 0,2931
Central domain 54 229 177 0,0492
C-terminal 230 240 10 0,9974
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-53
Central
54-229
C-terminal
230-240

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-H34
[NCBI] 		2718942 Uroviricota > Caudoviricetes > Pantevenvirales > Makaravirus > Makaravirus thirtyfour
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010670771.1 [NCBI]
Genbank nucleotide accession
NC_070965 [NCBI]
CDS location
range 155442 -> 156164
strand +
CDS
ATGCCCTTTATTCATAAGGACCACTTCCCACTGAACGTATCCATGGGTAAGGTGCGTGGCGCTCGCTACATTCACAAGTTTGGTGCTGTGCCTTCTATGTCACAGAACACCGAGGGCAGCGTATGGGACGTTAACGATACCCTCTACCCTTGGAGTACCTTTAGCACCCCTGCTGTTGCTTCTGTGCTTGCCGTAGATCCTCTAGACGACGGTAAGACTATCGAAATAGAAGGCCTCGACGAGAACTTCGACGTAGTAAAGGAAGATATTGTACTTTCGAGTTCAGGTGCAGCTACTGGGACACAAGTCTTTGCTCGCATCTACCGCGCCTACGTTAAGGTAGGTACAACCAACGAAGCTAATATTGATATTCAGGTCAACGCCACTACGGTTGCTCGTATCAGCGCAGGTATTGGTCAGACTCTTATGTCAGTTCTGACTATCCCTGCCGGACACACTGGTTATATGTTCAAGGGTATCTGCACCGCCGAGACGGGTGCTGACGGTAGTGGTTTTATGCTTGCCCGTTATGCTGGCACGGACACCTTCCGTGTGGGTCATACCTTCGAAGTCAATGGAAGTGGTGGTGAGTATCAGTACGAAACCTCCTTCCCGTTCCCCTTCCCTGAGATGACAGATATCGACGTCCGTATCAAAACCAGGACAAACAACGGTCGTTACACCGCTGCTTACGATATCCTGGTTATCAAAAACGACTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
604dd7a27ec2b09d0b63374cf4aaa5a0a27de03adc5f4009d972f9bb2c2bec5c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7257
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-H34 from the Huanghai Sea, China Jiang,T. 2019-04-04 — GenBank