Protein

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Genbank accession
YP_240092.1 [GenBank]
Protein name
pre-neck appendage protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MKLNLLKKLDTIFNDKFIGQNEQNYEKIEKAINGQNDDIEYHRNNEKDAHNSNNVTHYTKKGQKTNVGDELRYQNEVNDHLVLGALGNGQQEVRQSRVSIDAQQHQTLEERLKHDFLREKNDREKGLKNLLDKINRVVNVDEFGADPTGVKDSTNAFVKAFGNGNVQVTMSAGTYKVYGLKLPNNTRLVGQGKDITTIKLADEAPAETVVITNLSMGGNAKNIAIENFSVDGNRKRKNNSLKAAGGSLSSNVRFAGVKHGYIYNIKSFSTLLHGIDVTYGVDEYFYGGDGARPSESLESKYVHVNNCETYDFGDDGITVHWSRYILITDCYSHDPIGGGNNNGIEVDDGSQFVFLSDNKTENNYGGLEIKAHATASAPQNIFVNNHMSIRDTRSYNIRHIGHHKASDPQSKTAFNVVLSNCSSVYPQFNGVYPNTSPRAIVVCAFRNVLINNFSALGDSKWSSGQPVAVVQYRAENVTFNGVNIQGFSTASADLKIMGGNNRPKKITFANVNLYKSSKTTGISGGSKVYDTKIIGGNLIGAGTGNAIEMYNNTAEIVNVQAEGYTNQAVIAGRNYSKVPTVVKGGFSGASTGGGALAETSALIASTGGSYAHSNRSWVAGSGMNSHAYGSRSSVLNSLESETIPGSYCQTIVNSRGVKSPGNYHFLLGYGTNGARTSNIKIDMSSTSGNIKTAGQVTTSNNFADYAEYFESQSGGAIRNGTIVTLEGRYIRKCQENDVPLGVVSGTAGIILGDQTFHHKDRFERDEFGVILTEEQLKTWTDDSGNEYSEYVEVPIERPDYEENEYYESREERPEWNVVGLIGQIYIAVDNTVEKGDWIRSRNGKGTKDNANGYYQVMEVTTPYNQEKGYGVAVCYVHPVTKGAITNA
Physico‐chemical
properties
protein length:887 AA
molecular weight: 97016,04270 Da
isoelectric point:6,29267
aromaticity:0,08794
hydropathy:-0,55750

Domains

Domains [InterPro]
DC_0125
ATT
1–244
DC_0125 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR021865
IPR012334
STR
127–583
IPR012334 G3DSA:2.40.300.10
IPR011050
STR
135–525
IPR011050 G3DSA:4.10.80.40
IPR024535
ENZ
138–367
IPR024535 DC_0616
IPR006626
Unmapped
220–256
IPR006626
YP_240092.1
1 887
Architecture
ATT
STR
CHP
RBD
ATT 1-244 | STR 245-649 | CHP 650-703 | RBD 704-876 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_240092.1
1 887
Domain Start End Length (AA) Confidence
N-terminal 1 152 152 0,9929
Central domain 153 656 505 0,9776
C-terminal 657 887 230 0,8855
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-152
Central
153-656
C-terminal
657-887

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage 37
[NCBI] 		2936813 Uroviricota > Caudoviricetes > Azeredovirinae > Phietavirus pv37 >
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_240092.1 [NCBI]
Genbank nucleotide accession
NC_007055 [NCBI]
CDS location
range 14290 -> 16953
strand +
CDS
TTGAAATTAAATCTTTTAAAGAAGTTAGACACAATTTTTAATGATAAATTTATAGGGCAAAATGAACAAAACTACGAAAAGATAGAGAAAGCTATAAATGGACAGAATGATGATATTGAGTATCATAGAAACAATGAAAAAGATGCTCATAATTCAAACAACGTCACTCATTACACAAAGAAAGGTCAAAAAACTAACGTCGGTGATGAATTACGTTATCAAAATGAGGTAAATGACCACCTCGTTTTAGGAGCGTTAGGTAATGGCCAACAAGAAGTTAGGCAAAGTCGTGTATCAATTGATGCTCAACAACATCAAACGTTGGAAGAGCGATTGAAACACGACTTTTTACGTGAGAAGAATGATAGAGAAAAAGGTTTGAAAAACTTACTTGATAAAATCAATCGTGTAGTCAATGTCGATGAGTTTGGTGCTGATCCAACAGGTGTTAAAGATAGTACAAACGCATTTGTTAAAGCATTTGGCAATGGGAATGTACAAGTTACGATGTCTGCTGGGACTTATAAAGTCTATGGTTTAAAATTACCAAATAACACACGCTTAGTCGGACAAGGTAAAGATATAACAACAATTAAATTAGCAGATGAAGCGCCAGCTGAAACGGTCGTCATTACTAACTTATCTATGGGCGGTAATGCAAAAAATATTGCAATAGAAAACTTTAGTGTTGACGGTAATAGAAAACGTAAAAACAATTCGTTGAAAGCAGCAGGAGGTTCTCTATCAAGCAATGTTCGCTTTGCAGGTGTTAAACATGGTTACATTTACAACATTAAGTCATTTAGTACGCTTTTACATGGAATTGATGTAACTTATGGCGTAGATGAATACTTTTACGGCGGAGATGGTGCTAGACCTAGCGAATCATTGGAAAGTAAGTATGTTCATGTAAATAATTGTGAGACTTACGATTTTGGCGATGATGGCATAACTGTACATTGGAGTAGATACATTCTGATTACAGATTGTTATTCACATGATCCAATAGGCGGTGGAAACAATAATGGTATTGAAGTTGATGACGGCTCTCAATTTGTGTTTTTATCTGATAACAAAACTGAAAACAACTATGGCGGATTAGAAATAAAAGCGCATGCTACAGCTAGCGCTCCTCAAAACATTTTTGTAAACAACCACATGTCTATTAGAGATACACGTTCATACAATATTCGTCATATCGGGCATCATAAAGCAAGTGACCCTCAATCAAAAACTGCTTTTAATGTGGTATTAAGCAACTGTTCTTCAGTCTATCCACAATTTAACGGTGTATACCCTAATACAAGTCCTAGAGCAATCGTAGTATGCGCATTCCGTAATGTGCTTATAAATAATTTCAGTGCATTAGGAGACTCTAAATGGAGTAGTGGTCAACCGGTAGCAGTTGTCCAGTACAGAGCAGAAAACGTAACGTTTAATGGCGTTAATATTCAAGGCTTTTCCACAGCTAGTGCGGACTTAAAAATTATGGGTGGAAATAACAGACCTAAAAAGATTACTTTCGCCAATGTTAATTTGTACAAATCATCTAAAACGACTGGTATTTCTGGTGGTTCTAAAGTTTATGATACGAAGATAATCGGTGGTAACTTAATCGGTGCAGGTACTGGTAACGCAATAGAGATGTATAATAACACTGCCGAAATTGTGAATGTGCAAGCAGAAGGCTACACTAACCAAGCTGTTATCGCAGGCAGAAATTATTCTAAAGTCCCAACAGTTGTAAAAGGTGGTTTTAGCGGTGCTAGTACAGGTGGTGGAGCGTTAGCTGAAACATCTGCTTTGATTGCTAGTACAGGTGGTTCATATGCTCACAGTAACAGAAGTTGGGTTGCAGGTTCAGGTATGAACTCACACGCTTATGGATCACGTTCTTCAGTTCTCAACTCGCTTGAATCAGAAACAATACCAGGTAGTTACTGTCAAACGATTGTCAACAGTCGCGGCGTAAAATCACCAGGTAATTATCATTTCTTATTAGGTTACGGAACTAACGGAGCGAGAACATCAAATATAAAGATTGATATGTCATCTACAAGCGGTAATATCAAAACAGCAGGACAAGTTACAACAAGCAATAACTTTGCAGATTATGCGGAGTATTTCGAGTCACAAAGCGGTGGCGCAATCAGAAATGGTACCATTGTCACGTTAGAGGGTCGTTATATTCGAAAATGCCAAGAAAATGATGTGCCACTAGGCGTTGTATCTGGGACTGCAGGAATTATCTTAGGTGATCAAACTTTCCATCATAAAGATAGATTTGAACGTGATGAATTTGGTGTTATTCTAACTGAAGAACAATTAAAAACTTGGACAGATGATTCAGGAAATGAATACTCAGAGTATGTTGAAGTTCCAATCGAACGTCCAGATTATGAAGAAAACGAATACTATGAATCACGTGAAGAACGTCCAGAGTGGAATGTTGTTGGACTAATCGGACAAATCTATATCGCAGTAGATAATACAGTAGAAAAAGGCGATTGGATTCGCTCACGAAACGGAAAAGGTACGAAAGACAACGCTAACGGTTATTATCAAGTAATGGAAGTAACTACTCCATATAATCAAGAAAAAGGTTATGGCGTAGCAGTATGTTATGTACATCCTGTAACGAAAGGAGCAATCACTAATGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
438af632c63930bf5044bb2dff3ec55f63a152c2d3bad6b957e728d3a360dc30
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7607
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50