Protein

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Genbank accession
YP_009783848.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MEKSGIKTMYVPGDTYNVSKTIVVPRGVQLVFAPNAIIKPQNNINIFQMKPLASVEGATIDLKSFPSYDKACFYFNAADIFQFYEQSHVLKDINIMGVQKSSGWLGTGILMEANTPDSYIDNVKCNNITMTNIGKGIHLRVDPSITDNNHPSWVNANQFHQITIMNFDYGIYLEGHNSIPRDVGGNLFSQLQLQAEAGSKRMIYCESALNHFDGFFWDLHKMQVTNPAFEFTKTSKFNEVKSAMAQELTESWVDDGYLNSFPSPNNYVSDKRINAFPVSIPYTPNFLGNQDDWMVNGDKRGFTITQTSTHPIISGELTDLLSFDTEAGVTFNMSNVTYENPVVLEIDLSTDPCWYASFLTAVSPWGFQPKGYELDMFDIVSNKWMGGVHWTKNNKSQSHAVSAPWAGADKCTKVRIKFWGNNKVDDPKKPSPIPVATISRIMMTSTKDGGRAYMPYAATPTLPPPDITPILPADKTMVGDQDDILVQADKRYTVTSIGAAKTGGNIFGMFSLRKEQFCRWTNPTLAAPIIIEIDFGAKPIPYMESVGIAFGQGETPTNVKIERVTASGGSYVQLTNQAGLKTPSLHVASRAAQTYKLKFTIWGANNINTLVRVNRIFGTTGDGYPVAFVNTESDNTVYGDLSFGDTAKGIVLRSPDGSNWKMSIGNDGVQKWTKI
Physico‐chemical
properties
protein length:675 AA
molecular weight: 74726,81440 Da
isoelectric point:6,15733
aromaticity:0,10815
hydropathy:-0,27630

Domains

Domains [InterPro]
IPR012334
STR
2–200
IPR012334
IPR011050
STR
5–181
IPR011050 DC_0399
YP_009783848.1
1 675
Architecture
STR
RBD
STR 2-200 | RBD 201-262 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009783848.1
1 675
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0161
Central domain 11 373 364 0,9894
C-terminal 374 675 301 0,4294
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-373
C-terminal
374-675

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage B5S
[NCBI] 		1126949 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus cereus
[NCBI] 		1396 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009783848.1 [NCBI]
Genbank nucleotide accession
NC_047736.1 [NCBI]
CDS location
range 145521 -> 147548
strand -
CDS
ATGGAAAAGTCAGGCATTAAAACCATGTATGTTCCGGGAGATACATATAACGTATCGAAAACAATTGTAGTACCAAGAGGTGTACAACTAGTCTTCGCACCAAACGCCATTATAAAACCTCAAAATAACATTAACATATTTCAAATGAAACCTTTAGCTTCTGTAGAAGGAGCTACAATCGATTTAAAATCTTTCCCTTCCTATGACAAAGCGTGTTTCTACTTCAACGCAGCAGATATATTCCAATTCTACGAACAAAGCCATGTGCTAAAAGATATTAATATCATGGGTGTCCAGAAGTCTTCCGGTTGGCTTGGTACAGGAATACTCATGGAAGCAAACACACCTGATTCATATATAGATAATGTTAAATGTAATAATATAACAATGACGAATATCGGTAAAGGTATTCACTTACGTGTAGACCCATCTATCACAGATAATAATCATCCTTCATGGGTGAACGCGAACCAGTTCCACCAAATAACAATTATGAACTTTGATTATGGTATCTATTTAGAAGGACATAACAGTATACCTCGTGATGTTGGTGGCAACTTATTTAGTCAATTACAACTACAAGCAGAAGCAGGTTCTAAGCGCATGATTTACTGTGAATCAGCATTGAATCATTTCGACGGATTCTTTTGGGATTTACATAAGATGCAAGTTACAAATCCTGCATTCGAATTTACAAAAACATCCAAGTTCAACGAAGTAAAATCAGCTATGGCTCAAGAGTTAACAGAGTCATGGGTAGATGACGGATACTTAAACTCATTCCCTAGTCCAAACAACTATGTATCAGATAAACGCATTAACGCATTCCCTGTCTCTATTCCGTACACTCCTAACTTCTTAGGGAATCAGGACGACTGGATGGTAAATGGAGATAAACGAGGATTCACTATCACACAAACATCTACGCATCCGATTATATCCGGGGAACTAACAGACCTACTATCATTCGACACAGAAGCCGGAGTTACATTTAATATGTCCAATGTAACATATGAAAACCCGGTTGTTTTAGAAATAGATTTATCCACAGACCCATGTTGGTATGCATCATTCCTTACAGCCGTTTCACCGTGGGGATTCCAACCAAAAGGATACGAGTTAGACATGTTTGATATCGTATCAAATAAATGGATGGGTGGCGTACACTGGACAAAGAACAACAAGTCACAGAGTCACGCCGTATCAGCACCGTGGGCTGGCGCAGATAAATGTACAAAGGTTAGAATTAAGTTCTGGGGTAATAATAAGGTAGATGACCCTAAGAAACCATCACCTATACCTGTAGCTACTATATCTAGAATCATGATGACAAGTACAAAAGATGGTGGACGCGCATATATGCCATACGCAGCTACACCTACGTTACCACCACCAGATATCACACCTATACTACCAGCAGATAAAACAATGGTAGGTGACCAAGACGATATCCTAGTACAAGCAGATAAACGTTACACAGTCACTTCAATAGGCGCAGCTAAGACAGGCGGAAACATCTTCGGTATGTTCTCTCTTCGTAAAGAGCAGTTCTGTAGATGGACAAACCCAACTCTAGCAGCACCAATCATTATAGAGATAGATTTTGGAGCTAAACCAATACCATACATGGAATCTGTAGGTATAGCGTTTGGTCAAGGCGAGACTCCTACCAATGTAAAGATAGAACGTGTAACGGCTAGTGGCGGCTCATACGTCCAGCTTACAAACCAAGCAGGATTAAAGACACCTTCACTACATGTAGCTTCCAGAGCTGCACAAACGTATAAACTTAAATTCACAATCTGGGGCGCTAACAATATAAACACACTTGTTCGTGTCAATCGTATCTTTGGTACAACTGGAGATGGGTACCCAGTCGCATTCGTTAATACAGAGAGTGATAACACTGTTTATGGCGACTTATCCTTCGGTGATACAGCAAAAGGTATTGTACTTCGTTCACCCGACGGTAGCAACTGGAAAATGAGCATAGGTAACGATGGCGTACAAAAATGGACAAAAATTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
ce18a349810cf13427e2e7d3182675d11cda79e1c4a7cdf7f5d2c5930c02e450
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7264
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Bacillus cereus Bacteriophage B5S Lee,J.-H., Shin,H., Son,B. and Ryu,S. 2012-01 — GenBank