Protein

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Genbank accession
AUR85245.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSKQFGLDGVSDHVEFGKDGNKLDMTNGHALVTDHAGDAIEVRGKDATHSSSFATKGQLDAATGADGGTVWIEYTTEPEITSLSANTYVEFDLTTGAADLMADHSTIPSGITWNGSDARTYAIDITNGLIKPNDLNKQPHLISVEIAYANVGGSTDNDTEMKVKLVEYDGTNEKNNPTIIKTFRKAYNDGGSGTTTIDFNTNASSHTNGTGKGWRLYFASNEGDGSVSIKIKSIRMKCG
Physico‐chemical
properties
protein length:239 AA
molecular weight: 25480,64750 Da
isoelectric point:4,99003
aromaticity:0,07113
hydropathy:-0,52050

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.071.A._10N.286.46.A12
[NCBI] 		1881313 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR85245.1 [NCBI]
Genbank nucleotide accession
MG592448.1 [NCBI]
CDS location
range 9729 -> 10448
strand +
CDS
ATGTCTAAACAATTTGGATTGGATGGTGTTAGTGACCATGTTGAGTTCGGCAAGGATGGTAATAAGCTCGATATGACAAACGGCCATGCGCTAGTCACAGACCACGCAGGAGACGCGATTGAAGTGAGGGGTAAAGATGCCACTCACTCAAGCTCATTTGCAACCAAAGGCCAGTTAGACGCTGCAACAGGTGCCGATGGCGGCACGGTGTGGATTGAGTACACAACAGAGCCAGAAATCACCAGTCTAAGCGCAAACACATATGTTGAGTTTGACCTAACAACGGGTGCAGCTGACCTAATGGCAGACCACAGCACAATTCCAAGCGGTATTACGTGGAATGGCTCTGACGCCCGAACCTACGCTATCGATATAACCAACGGCTTAATCAAGCCTAACGACCTAAACAAACAACCTCATTTAATCAGTGTGGAAATCGCTTATGCCAATGTAGGCGGCTCAACTGACAATGACACAGAAATGAAGGTCAAATTGGTTGAGTACGATGGCACTAACGAAAAGAACAATCCGACAATCATCAAAACCTTTCGTAAGGCTTACAATGATGGCGGGTCAGGCACTACAACGATTGACTTCAACACTAACGCATCAAGTCACACAAATGGCACAGGTAAAGGATGGAGGTTATATTTTGCAAGTAACGAGGGTGATGGCTCAGTAAGCATCAAGATAAAATCAATTCGTATGAAATGCGGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1b6117600bb980b493a7f156edf3613200c2e58ad94d55a6d24f8f585dfc8d87
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5539
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank