Protein

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Genbank accession
QOI58119.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSDITTNAVVVNPRPIFTDSRTFRAVANGKIYVGKIDTDPTIPSNQIPVYLENENGDKVQIPQPLIVNNAGKIVYNGQLAKVVTVNGYSIAVYDAYGSQVDYIPNVLGYDPDSFKDQLAGPDGASLIGYGNGTVADKLDELKTPFDFGAKGDGVTDDTLALQAYIDGVDGDIDLYGKTYLVSKNPALATTYPTEPDLANNGYNFCPCLAIVNKTNKRIFNGTLVSKVFGQSVLSIINSTGIEVNLKIVGFGKFPAIDHPSGYAEKGYSTGGYNTIDGGLLLGPNNSIPTSSYTLGKYNGVSGQFPIYDASCNPTGGYQSTWGAFGGGYIGSYACAVTIQRACKNITLRGCEIYGFNEAAVGIGIRFIVSSTGYTDYTTDADVPRGVNVLDCYLHDCYTAGVHVCSGYNIVYDSLRVENIGHPNADDATDTDINPGYGVTTSRFRNIRNITCVNSFFLNCKRKSIDFHAGGQLIVDGNYCMRTGVNGIYFEAGFGWDNGYEPYNVIVTNNYIVTRALGVVGTGGISMVGNGSALAESYPYPFLKCNNNYIEVRAANGVGINNGYNNNDYHYEDINICDNTVVYKSDTYTPGQFVAIRCNLNTPSSTTLPKQNIKLCRNSIKILTTLGNYAFGTPITIGGTPAVLIATDNTVDMGNVANGSSAWYATITPNPITDYYFSGNKILNYIKPATLRQAEVMFYDNIGFTATGTYVSIAMQWFRGIWTVDAAGLDSLAGAKSVTLASDGVGITQGTPIQHGSISAAMTISSSNIGFTTTAGTTCYVGVKMKPVGIKA
Physico‐chemical
properties
protein length:791 AA
molecular weight: 84557,85250 Da
isoelectric point:5,16447
aromaticity:0,10746
hydropathy:-0,07686

Domains

Domains [InterPro]
IPR009093
ATT
1–112
IPR009093 DC_2212 IPR006626 IPR006626 IPR006626 IPR006626
IPR036730
ATT
2–111
IPR036730 IPR011050
IPR036730
ATT
7–108
IPR036730 IPR012334
DC_0622
RBD
515–790
DC_0622
QOI58119.1
1 791
Architecture
ATT
ATT
STR
RBD
ATT 1-112 | ATT 135-169 | STR 170-699 | RBD 700-790 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QOI58119.1
1 791
Domain Start End Length (AA) Confidence
N-terminal 1 156 156 0,9886
Central domain 157 690 535 0,9962
C-terminal 691 791 100 0,9745
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-156
Central
157-690
C-terminal
691-791

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage HF4s
[NCBI] 		2775262 No lineage information
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOI58119.1 [NCBI]
Genbank nucleotide accession
MT833387.1 [NCBI]
CDS location
range 13667 -> 16042
strand +
CDS
ATGTCAGATATCACAACAAATGCTGTTGTCGTAAACCCACGCCCTATTTTCACCGACTCAAGAACGTTCCGAGCAGTTGCTAATGGTAAAATCTACGTAGGGAAAATAGACACCGACCCAACCATTCCATCAAACCAGATCCCGGTCTACCTTGAAAATGAGAATGGTGACAAGGTTCAAATCCCTCAACCACTCATCGTAAATAACGCTGGCAAGATTGTTTACAACGGACAGTTAGCAAAGGTCGTAACGGTAAACGGTTATAGCATTGCCGTATATGACGCCTACGGTTCTCAAGTTGACTATATCCCAAACGTCCTTGGGTACGATCCAGATAGCTTCAAAGACCAATTAGCTGGCCCAGACGGAGCATCGTTAATTGGTTATGGCAATGGAACGGTTGCAGATAAGCTTGATGAGCTTAAGACGCCATTTGACTTCGGCGCTAAAGGGGATGGAGTAACTGACGACACGCTGGCATTACAAGCATACATTGATGGTGTAGATGGCGACATTGACTTATACGGAAAAACTTATCTAGTTAGCAAAAACCCAGCACTTGCAACTACCTATCCAACGGAACCTGATTTAGCCAACAATGGATACAACTTCTGCCCGTGTCTCGCTATAGTTAATAAAACCAATAAGAGAATCTTTAACGGCACACTCGTCAGCAAGGTATTTGGTCAGTCTGTTCTGTCTATCATCAACAGCACAGGAATAGAAGTTAACCTTAAAATTGTTGGGTTTGGTAAGTTTCCTGCCATTGACCACCCTAGTGGATATGCGGAAAAAGGATATTCAACTGGGGGCTACAATACGATTGATGGAGGCCTTCTTCTTGGCCCAAACAATTCAATCCCCACCTCCAGCTATACGCTAGGAAAGTACAATGGGGTATCAGGTCAGTTCCCAATATACGATGCCTCATGTAACCCTACAGGTGGATATCAGTCTACTTGGGGTGCATTTGGAGGGGGTTACATTGGTAGCTATGCATGTGCTGTAACTATTCAGCGGGCATGCAAAAATATAACACTACGCGGCTGTGAGATATACGGATTCAATGAAGCTGCTGTCGGCATTGGCATAAGATTTATTGTCAGCTCCACTGGATACACCGACTATACAACCGATGCTGATGTTCCTCGTGGGGTTAACGTCCTGGATTGCTATCTGCATGACTGCTACACAGCAGGAGTGCACGTATGCTCAGGGTACAATATTGTTTATGACTCGTTAAGAGTGGAGAACATTGGTCATCCCAATGCAGATGACGCAACAGACACAGACATTAACCCAGGATACGGAGTAACAACATCAAGATTTAGAAACATCCGAAACATAACTTGCGTGAATAGTTTCTTCCTAAATTGCAAACGCAAATCTATCGATTTCCATGCAGGCGGGCAATTGATAGTTGATGGAAACTATTGCATGAGAACAGGTGTCAATGGCATATATTTTGAGGCGGGATTTGGTTGGGATAATGGATACGAGCCATATAACGTCATTGTTACTAACAATTACATTGTTACAAGAGCACTAGGCGTGGTTGGCACTGGTGGGATTTCCATGGTAGGAAATGGCTCCGCCCTAGCAGAGTCATACCCGTATCCTTTTTTGAAGTGTAACAACAACTATATTGAGGTAAGGGCTGCCAACGGGGTGGGTATTAATAATGGTTACAACAATAACGATTACCACTATGAGGACATAAACATATGTGATAATACGGTTGTATACAAATCTGACACCTACACCCCGGGTCAGTTTGTTGCTATTCGTTGCAACCTAAATACTCCTTCATCTACTACTCTTCCGAAGCAAAACATCAAGCTCTGTCGTAACAGCATAAAAATCCTGACAACGCTTGGTAATTACGCATTCGGAACTCCAATAACCATCGGTGGAACTCCTGCTGTTCTTATTGCAACCGATAATACAGTGGATATGGGGAACGTAGCTAATGGATCAAGTGCATGGTATGCGACAATTACCCCCAACCCAATAACTGACTATTACTTCTCAGGTAATAAAATACTTAACTACATTAAACCAGCCACTTTAAGACAAGCGGAAGTTATGTTCTATGACAACATAGGATTTACTGCCACAGGAACTTATGTTTCGATAGCTATGCAGTGGTTTAGAGGGATATGGACGGTTGATGCAGCTGGTCTCGATTCACTTGCTGGCGCTAAGTCAGTTACCCTTGCATCTGACGGGGTCGGGATCACTCAGGGAACCCCGATACAACATGGGTCAATATCAGCTGCAATGACAATAAGTTCATCTAATATTGGGTTTACTACCACCGCCGGAACGACATGCTACGTTGGCGTAAAAATGAAACCTGTTGGTATTAAAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
345d901dd535047773a4418c0ddf05e6311f9185f8ffe928e63a6fd4e03f9129
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7157
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A novel temperate seroconverting bacteriophage HF4s, isolated from horse feces Kulikov,E.E., Golomidova,A.K. and Letarov,A.V. 2020 — GenBank