Protein

View in Explore
Genbank accession
ADH03040.1 [GenBank]
Protein name
gp18
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSITKISKSVMEVTADYQKLSDLNVAFYNQDINTAILQFNVTRNDAPVPLGKSNVDGYIVLLHEDGSRIQDNLVIEDEEHGVIQYTIPREFLKHTGKVLGQVYIAVKGRDDTAVMRKISFDIKQDLMTAFSAAVKLEYIKTFDDLQTKIKQRVEAIEEAIANGEDYVAQMAETLNTGKKEIAATVSKATTDVNKAATDATKKITDTSNTAVATVNAKGDEVVKKITDADVVQKKDALFYTDGKGFSRPVPNGITDWYQISTAGNYSITKIEVPTNAPPVGVYFNLIVNTRTSTTRDLTAINVTTGVIYTNAMTGVDNWSGWSKVATDKEAQMQKITADDGAAKVYIKATMDVYEELLKLERGFYSIYISAGASNSPSMTVRGSVFVEAKAQWLSVQGVGSNGKVYSIHYTGSAWIGWLIAASESIAQIPKITNDDGSSITLTNYDLLNTTDVSNFDGYVTSASNVPTTSNSGYFKRKYRSGYIEITFAPHSQKDVFRNAYNFSTKNWTGWEKIVNQSDLDKLISDTGWITYNTVNGVLANTAFKASGENGYNCAYRKITSNGITRLLLRVNISNITTASGIFANLPNNIVVNSQTGVARTNGANQKTVVTLRPSGDLSINIPVDFKAPDYVYQQFEWTL
Physico‐chemical
properties
protein length:639 AA
molecular weight: 70155,00490 Da
isoelectric point:6,09146
aromaticity:0,09233
hydropathy:-0,25712

Domains

Domains [InterPro]
DC_0885
STR
1–377
DC_0885 DC_0415
G3DSA:2.60.40.3350
ATT
8–129
G3DSA:2.60.40.3350
IPR018913
ATT
11–151
IPR018913
ADH03040.1
1 639
Architecture
ATT
STR
STR
ATT 1-151 | STR 152-377 | STR 410-636 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ADH03040.1
1 639
Domain Start End Length (AA) Confidence
N-terminal 1 458 458 0,9418
Central domain 459 628 171 0,0234
C-terminal 629 639 10 0,9983
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-458
Central
459-628
C-terminal
629-639

Taxonomy

  Name Taxonomy ID Lineage
Phage Brochothrix phage NF5
[NCBI] 		764561 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Brochothrix thermosphacta
[NCBI] 		2756 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADH03040.1 [NCBI]
Genbank nucleotide accession
HM144385 [NCBI]
CDS location
range 16099 -> 18018
strand +
CDS
ATGAGCATCACAAAGATTTCAAAATCAGTAATGGAAGTGACTGCTGATTATCAAAAATTAAGCGATTTAAATGTCGCTTTTTATAATCAAGACATTAATACGGCGATACTGCAGTTTAACGTGACACGCAATGATGCACCTGTACCGTTAGGTAAATCTAATGTTGATGGTTATATCGTGTTATTACACGAAGATGGCAGCCGCATACAAGACAACCTTGTCATTGAAGACGAAGAACATGGTGTTATCCAATACACGATACCGCGTGAGTTTTTAAAGCATACAGGCAAGGTGTTAGGTCAAGTTTACATCGCTGTTAAAGGTCGTGACGACACAGCTGTTATGCGAAAAATATCATTTGATATTAAACAGGATTTAATGACAGCGTTTAGTGCTGCTGTGAAGCTTGAATACATCAAAACTTTTGATGATTTACAAACGAAAATAAAGCAGCGTGTCGAGGCTATTGAAGAAGCAATTGCTAACGGTGAAGATTACGTCGCCCAAATGGCAGAAACGCTTAATACAGGTAAAAAAGAGATTGCTGCTACTGTCTCGAAAGCTACTACAGACGTCAATAAAGCTGCTACTGATGCAACTAAAAAAATTACTGACACTAGTAATACAGCAGTTGCAACTGTTAATGCAAAGGGTGATGAAGTTGTTAAAAAAATCACCGATGCAGATGTCGTACAAAAAAAAGATGCTCTTTTTTATACGGATGGCAAGGGTTTTAGTCGTCCTGTACCAAATGGAATTACAGACTGGTATCAAATTTCCACAGCTGGCAATTATAGTATAACTAAAATAGAAGTGCCTACGAATGCACCACCCGTCGGCGTGTATTTTAATCTTATCGTCAATACACGCACATCTACAACTCGTGATTTAACAGCTATTAACGTTACTACTGGTGTTATCTATACTAACGCTATGACAGGGGTCGACAATTGGTCTGGTTGGAGTAAGGTAGCGACAGATAAAGAGGCTCAAATGCAAAAAATCACGGCTGATGATGGTGCAGCAAAAGTATACATTAAAGCGACGATGGACGTCTACGAAGAGTTACTGAAGCTAGAAAGAGGTTTTTACAGTATTTACATCAGCGCAGGAGCTAGTAACAGCCCTTCTATGACCGTAAGAGGTAGTGTTTTTGTCGAAGCTAAGGCTCAGTGGTTAAGTGTTCAAGGCGTTGGGTCTAACGGTAAAGTTTATTCCATACATTATACAGGCTCAGCTTGGATTGGTTGGTTGATCGCTGCCTCAGAATCGATCGCGCAGATACCTAAAATAACAAATGATGATGGATCATCGATCACGTTAACTAACTACGATTTACTCAATACAACTGACGTTTCAAATTTTGACGGTTATGTAACGTCGGCTAGTAATGTACCTACGACTAGTAATAGCGGTTATTTCAAACGAAAATATAGATCTGGCTATATAGAAATTACCTTTGCCCCGCATTCTCAAAAAGACGTATTCCGAAATGCTTATAATTTCTCAACTAAAAACTGGACAGGTTGGGAGAAAATTGTCAATCAATCTGATTTAGATAAATTAATAAGCGACACAGGGTGGATCACTTATAATACGGTCAACGGTGTATTAGCTAACACAGCGTTCAAGGCATCTGGGGAAAATGGGTATAACTGTGCATACCGAAAGATAACATCGAACGGTATTACTCGTTTATTGTTACGTGTTAACATAAGCAACATCACGACGGCATCCGGTATCTTTGCAAACTTACCTAACAATATAGTAGTTAACTCTCAAACGGGTGTAGCCCGTACCAATGGTGCGAATCAAAAAACAGTTGTAACGCTCCGCCCATCAGGTGATTTAAGTATCAATATACCTGTAGACTTTAAAGCACCTGATTATGTTTATCAACAATTTGAGTGGACATTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
af6cd8e99b146441187a7b6035f2cd6faac7386dff2abd8ccc3b74a5080f75df
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8297
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of three heterogeneous Brochothrix thermosphacta bacteriophages Kilcher,S., Loessner,M.J. and Klumpp,J. 2010-10-15 — GenBank