Protein

View in Explore

Genbank accession

YP_009126469.1 [GenBank]

Protein name

tail protein

RBP type

Evidence RBPdetect

Probability 0,69

Evidence RBPdetect2

Probability 0,91

Protein sequence

MARLAKSDFANDFAVGLFRTTHNWNIHAKISKRDLVDGQTTYKIKETFVIGDSEQLGWESPSPYCWFNMVPSGYSISVDHYKVEKGNMATDWTPAPEDTDQAISKVSQTADAIRADLTNTKGDVASVKATANSLQGQITDNKNNISAVKQTADSITTRVSNAEGNVSGLQQTASKLQSDLTNAKGDISSLQQTTNGLTSRVGSAEGNISQLQQTADKLTSRMTNAEGSVSSLQQTAKSLQSTVTDHSDRISQLQQDASGLSATVLGGGNLLNNTSDTLRKFTGTDWIWYAESNDEPVAKHQLDGQKVTLSVWIENPSKEAWVQMWTDKGMAQGNKIPAGGKGWSQVTYTMPRGFTHWNIVVGCGNDPGLITLSYSSLQLELGPNRTTWKPSNGDIAQLKVTADGLTTRVSNAEGNVSGLQQTASKLQSDLTNAKGDISSLQQTTNGLTSRVGSAEGNISQLQQTADKLTTRMSNAEGNVSNLEQTAQGLTADMKDAKGNISSLQDTASGLASRMSNAEGDISNVQQTANNLNAYIKRSKGSSTLAALLSMDPNNSTIGQVVNGHIVAGINMSSDGSLKIVGDKLHITAGTTIDQAVIHAANIDSVDASTIRVGTLDASKVKVTNLDADNITTGTLAAEHLHVTKDTVIDNGIIGNAQIADLNADKIKAGTLDASHVQVTNLDANNIVTGTLAAERLHVTKDTVIDNGIIKDAMIANLNAGKITAGTLDASKIDVQNLTADKITSGTLDADKVNIINLNADKITSGTLDAAHVNVINLDANSITTGSLRAALYDVSTFTDYGVGPSSPWDFDLTKSSYGNWFLNGETTADHVYNGPRYPGGQKLTPYMYVTSRGSADGSRVTVTVWKDNDPTQYQRVWNGRSWSDWVMLPNSQNLVSAINLNPDSIKISGKNIELSGDTTVTGQLDLMQKNTNWVNQDSNYHNPWSWNNAHIYFNNYLQLLGENCDVTYEDNSHLNGGRKFYSIGTLTPGYLKFTTYKNKVNSTDEKFDGQIARTYIDSSRIETDDVWAGDLRIVGHHIRAADDKFVIVSNHAGTNFDNNGSVGFQVYGGIGLGKATIYTPDLDLYIQRGNAVTALSQSYNNAGKVDVHCNRVISQRANSVSSRLSVKTDITPVSYDRALAAVMGTEMYDYRYTSDESGQHYVSGIIDDVNPDPQYHMDDMLINKERTARIDANLVGYHHVVLQELLKKIDKLEIKLKSLETIL

Physico‐chemical properties

protein length:	1223 AA
molecular weight:	132154,82250 Da
isoelectric point:	5,44031
aromaticity:	0,06051
hydropathy:	-0,43107

Domains

Domains [InterPro]

DC_2041
STR
68–202

DC_2041 G3DSA:1.20.5.340 DC_2041 DC_1258 DC_1258 DC_0203

G3DSA:1.20.5.340
STR
69–173

G3DSA:1.20.5.340 DC_1277 G3DSA:1.20.5.340 G3DSA:1.20.5.340 DC_1258 IPR030392

PTHR45916
Unmapped
100–256

PTHR45916 SSF57997 Coil

SSF57997
STR
109–257

SSF57997 Coil Coil

IPR012892
RBD
147–208

IPR012892 Coil IPR012892

Coil
Unmapped
159–193

Coil Coil DC_0469

G3DSA:1.20.5.340
STR
174–215

G3DSA:1.20.5.340

YP_009126469.1

1 1223

Architecture

STR

RBD

STR

RBD

STR 68-312 | STR 355-540 | RBD 541-634 | STR 635-880 | RBD 1090-1223

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_2041	STR	DC_2041	68	202	Novel HMM	DC_2041	Central	Low	Positional only	25 proteins / 25 hits
G3DSA:1.20.5.340	STR	G3DSA:1.20.5.340	69	173	Merged direct domain	G3DSA:1.20.5.340	Central	Low	Positional only	38 proteins / 38 hits
PTHR45916	Unmapped	-	100	256	PANTHER	STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5	-	-	-	-
SSF57997	STR	SSF57997	109	257	Merged direct domain	SSF57997	Central	Low	Positional only	14 proteins / 14 hits
IPR012892	RBD	DC_0453	147	208	InterPro cluster	Gp58-like	C-terminal	Low	Positional only	116 proteins / 119 hits
Coil	Unmapped	-	159	193	Coils	Coil	-	-	-	-
DC_1277	STR	DC_1277	173	312	Novel HMM	DC_1277	Central	Low	Positional only	37 proteins / 37 hits
G3DSA:1.20.5.340	STR	G3DSA:1.20.5.340	174	215	Merged direct domain	G3DSA:1.20.5.340	Central	Low	Positional only	38 proteins / 38 hits
Coil	Unmapped	-	201	228	Coils	Coil	-	-	-	-
G3DSA:1.20.5.340	STR	G3DSA:1.20.5.340	216	265	Merged direct domain	G3DSA:1.20.5.340	Central	Low	Positional only	38 proteins / 38 hits
Coil	Unmapped	-	236	256	Coils	Coil	-	-	-	-
DC_2041	STR	DC_2041	355	498	Novel HMM	DC_2041	Central	Low	Positional only	25 proteins / 25 hits
G3DSA:1.20.5.340	STR	G3DSA:1.20.5.340	387	465	Merged direct domain	G3DSA:1.20.5.340	Central	Low	Positional only	38 proteins / 38 hits
SSF57997	STR	SSF57997	406	529	Merged direct domain	SSF57997	Central	Low	Positional only	14 proteins / 14 hits
Coil	Unmapped	-	409	443	Coils	Coil	-	-	-	-
Coil	Unmapped	-	451	506	Coils	Coil	-	-	-	-
IPR012892	RBD	DC_0453	459	639	InterPro cluster	Gp58-like	C-terminal	Low	Positional only	116 proteins / 119 hits
G3DSA:1.20.5.340	STR	G3DSA:1.20.5.340	466	540	Merged direct domain	G3DSA:1.20.5.340	Central	Low	Positional only	38 proteins / 38 hits
DC_0469	RBD	DC_0469	469	640	Novel HMM	DC_0469	C-terminal	Low	Positional only	48 proteins / 48 hits
DC_1258	STR	DC_1258	635	698	Novel HMM	DC_1258	Central	Low	Positional only	17 proteins / 17 hits
DC_1258	STR	DC_1258	692	755	Novel HMM	DC_1258	Central	Low	Positional only	17 proteins / 17 hits
DC_1258	STR	DC_1258	751	880	Novel HMM	DC_1258	Central	Low	Positional only	17 proteins / 17 hits
DC_0203	RBD	DC_0203	1090	1223	Novel HMM	DC_0203	C-terminal	Low	Positional only	178 proteins / 178 hits
IPR030392	CHP	DC_0088	1122	1216	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
Coil	Unmapped	-	1202	1222	Coils	Coil	-	-	-	-

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Lactobacillus phage Ldl1 [NCBI]	1552735	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Lactobacillus delbrueckii subsp. lactis [NCBI]	29397	Bacteria > Firmicutes > Bacilli > Lactobacillales > Lactobacillaceae > Lactobacillus

Coding sequence (CDS)

Genbank protein accession

YP_009126469.1 [NCBI]

Genbank nucleotide accession

NC_026609 [NCBI]

CDS location

range 30519 -> 34190
strand +

CDS

ATGGCACGTCTGGCCAAAAGTGATTTTGCTAATGATTTTGCTGTTGGACTTTTTAGAACGACTCATAACTGGAATATACATGCGAAAATTAGCAAAAGAGACTTAGTTGATGGTCAAACTACTTATAAGATTAAGGAAACATTTGTAATCGGCGACTCGGAGCAATTAGGTTGGGAATCGCCAAGCCCTTATTGTTGGTTTAATATGGTGCCATCTGGATATAGCATAAGTGTTGATCATTACAAAGTTGAAAAAGGCAACATGGCTACAGACTGGACGCCTGCCCCAGAGGATACCGACCAAGCGATCAGCAAGGTCAGTCAAACGGCCGATGCAATACGTGCGGACTTGACCAACACAAAAGGTGATGTTGCAAGTGTTAAAGCCACGGCAAACAGTCTGCAGGGTCAGATCACGGACAATAAAAATAATATTTCTGCGGTCAAACAAACGGCAGACAGCATCACTACCCGTGTATCCAACGCAGAAGGAAACGTGTCTGGCCTACAACAAACCGCAAGCAAGCTCCAGTCTGACTTGACCAACGCTAAAGGTGACATCAGCAGTTTACAACAGACGACAAATGGACTGACATCACGGGTTGGCAGTGCTGAGGGGAATATCTCGCAGTTACAGCAAACTGCTGATAAACTGACCTCCAGAATGACCAATGCCGAGGGTAGCGTAAGTAGTCTCCAACAGACGGCTAAAAGCTTGCAATCTACCGTGACAGACCATTCCGACAGGATTTCACAATTACAGCAGGATGCGAGTGGATTGAGTGCTACGGTGCTAGGCGGTGGCAACCTACTAAACAACACCAGTGATACTTTGCGAAAATTTACGGGCACCGATTGGATATGGTATGCCGAATCCAATGACGAACCAGTTGCGAAACATCAACTCGATGGGCAAAAAGTCACTCTTAGCGTATGGATTGAAAATCCGTCCAAAGAAGCTTGGGTGCAAATGTGGACAGACAAAGGAATGGCTCAAGGCAATAAGATTCCTGCGGGGGGAAAAGGTTGGTCGCAGGTAACTTACACAATGCCTAGAGGATTTACTCACTGGAATATCGTTGTGGGGTGCGGTAATGATCCGGGACTAATCACGCTTAGCTACTCCAGCCTCCAACTGGAACTTGGTCCAAACCGCACCACCTGGAAACCATCTAATGGCGACATAGCTCAGCTTAAAGTTACGGCCGATGGGCTGACCACCCGTGTATCCAACGCAGAAGGAAACGTGTCTGGCCTACAACAAACCGCAAGCAAGCTCCAGTCTGACTTGACCAACGCTAAAGGTGACATCAGCAGTTTACAACAGACGACAAATGGACTGACATCACGGGTTGGCAGTGCTGAGGGGAATATCTCGCAGTTACAGCAAACTGCTGATAAACTGACCACGAGGATGTCAAACGCAGAAGGTAATGTTTCCAATTTGGAACAGACGGCGCAGGGACTGACCGCAGACATGAAGGACGCTAAGGGGAATATTTCCTCGCTCCAGGATACGGCCAGTGGGTTGGCCTCCCGTATGTCTAACGCAGAGGGGGACATCTCCAACGTCCAGCAGACGGCCAACAACCTCAACGCCTATATCAAGAGGTCAAAAGGTTCAAGCACTCTGGCCGCTCTGTTGTCGATGGATCCAAACAACTCAACGATCGGTCAGGTTGTCAACGGGCACATAGTTGCTGGGATTAACATGTCCTCTGATGGTAGCCTAAAAATTGTCGGTGATAAACTCCACATTACGGCTGGCACCACGATTGACCAGGCTGTTATTCATGCGGCTAATATTGACTCTGTTGATGCTTCAACGATTAGGGTAGGTACGCTAGATGCATCTAAAGTTAAGGTTACGAACTTGGATGCTGATAACATCACCACAGGGACGTTAGCGGCAGAACACTTGCACGTAACCAAGGATACTGTTATTGACAATGGGATAATTGGCAATGCTCAGATCGCAGACCTCAATGCTGACAAAATTAAAGCTGGGACTCTTGATGCGTCTCATGTGCAAGTAACCAACCTTGATGCTAATAATATTGTAACAGGGACTTTAGCTGCGGAACGTTTGCATGTTACCAAGGACACAGTGATCGATAACGGAATAATCAAAGACGCTATGATAGCTAACCTCAACGCCGGAAAAATTACTGCGGGTACACTCGACGCATCTAAAATAGACGTTCAAAACTTGACTGCTGACAAGATCACGTCTGGGACGCTTGATGCAGACAAGGTTAACATAATCAACTTGAACGCTGACAAGATCACGTCTGGGACGCTTGATGCAGCTCACGTGAACGTAATTAATCTTGACGCAAATTCTATCACGACAGGATCACTAAGAGCAGCTCTTTACGATGTAAGTACTTTTACGGACTACGGTGTTGGGCCATCTAGCCCATGGGACTTCGATCTCACTAAGTCGTCATATGGTAATTGGTTCTTGAACGGCGAAACGACTGCCGATCATGTTTATAACGGACCAAGATATCCCGGAGGTCAAAAACTAACTCCGTATATGTACGTAACAAGCCGAGGGTCTGCGGACGGCAGTCGGGTTACTGTAACCGTGTGGAAGGACAACGACCCGACACAATATCAGCGTGTTTGGAATGGCAGGTCTTGGTCAGACTGGGTAATGCTTCCTAACAGCCAAAATCTTGTTTCCGCTATCAATCTTAACCCAGACAGCATAAAGATCAGTGGCAAGAATATCGAACTGAGCGGCGATACGACAGTTACTGGTCAGCTTGACTTAATGCAAAAAAACACAAACTGGGTAAATCAAGACTCTAACTACCACAACCCTTGGAGCTGGAATAATGCTCACATTTACTTCAACAATTATCTTCAATTACTTGGTGAAAATTGCGATGTTACGTATGAAGACAATTCCCACTTAAATGGTGGACGAAAATTCTATTCAATCGGCACCTTAACGCCAGGATACTTAAAATTCACCACCTATAAAAATAAGGTAAATTCAACAGATGAAAAATTTGATGGTCAAATTGCAAGAACCTACATTGACTCTAGTAGAATTGAAACGGATGATGTCTGGGCAGGCGATTTACGCATCGTAGGCCATCATATCAGAGCAGCCGACGACAAATTTGTGATCGTATCTAACCACGCAGGTACAAACTTTGATAATAATGGTTCTGTTGGTTTCCAGGTCTATGGTGGTATTGGTTTGGGCAAAGCTACGATCTACACGCCAGATCTTGATCTGTATATCCAGCGGGGTAATGCCGTCACAGCACTGAGCCAGTCTTACAACAACGCTGGTAAGGTCGATGTGCATTGCAATAGAGTTATCTCTCAGAGAGCTAACTCGGTATCGTCCCGGCTTTCAGTTAAGACCGACATCACGCCTGTCTCTTACGACCGAGCACTGGCTGCGGTTATGGGCACGGAGATGTACGACTACCGCTATACTAGTGATGAAAGTGGTCAGCACTACGTGTCCGGGATTATCGATGATGTTAATCCAGACCCTCAATACCATATGGATGACATGTTAATCAACAAAGAAAGAACTGCACGTATTGATGCAAATCTTGTCGGTTATCATCATGTAGTTTTGCAAGAACTTCTTAAAAAGATAGATAAATTAGAAATTAAATTGAAGTCATTAGAAACCATATTATAA

Genome Context

Tertiary structure

PDB ID

aafa0bc1d84da0540fc0550a57499a6f3d4e44d61eeaf5075561c9b4e36fe206

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,3203

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence