Protein

View in Explore
Genbank accession
QKE55379.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,57
Protein sequence
MGNKGAMTIRVTTPSTSSGGGTTNAQFTYINHGGDYAPGWRRDYSTKNQQPAFALGQTGSTVGNDKAVGWNSNSGVYNATISGASTLILHFNMNAGSCPAVQFRVNYKNGGIYYRSARDGYGFEADWSEFYTTTRKPSAGDVGAYTKAESDSRYVRDIRLGTRVVQTMQKGVMYEKSGHAITGLGIVGEVDGDDPAVFRPIQKLINGTWYNVSQV
Physico‐chemical
properties
protein length:215 AA
molecular weight: 23216,40170 Da
isoelectric point:9,25342
aromaticity:0,11163
hydropathy:-0,50651

Domains

Domains [InterPro]
DC_0111
RBD
2–215
DC_0111
IPR022246
RBD
56–152
IPR022246
QKE55379.1
1 215
Architecture
RBD
RBD 2-215
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QKE55379.1
1 215
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0040
Central domain 11 204 195 0,0181
C-terminal 205 215 10 0,9983
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-204
C-terminal
205-215

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage vB_YpM_5
[NCBI] 		2736201 No lineage information
Host Yersinia pestis EV76-CN
[NCBI] 		665028 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Yersiniaceae > Yersinia > Yersinia pestis

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QKE55379.1 [NCBI]
Genbank nucleotide accession
MT374853.1 [NCBI]
CDS location
range 246 -> 893
strand +
CDS
ATGGGTAATAAAGGTGCCATGACCATCCGTGTAACCACCCCGAGCACTTCCAGCGGTGGCGGAACTACTAATGCACAATTTACTTATATAAACCACGGTGGAGATTATGCGCCAGGCTGGCGGCGTGACTACAGTACCAAAAATCAGCAGCCTGCATTTGCTTTAGGGCAGACAGGAAGCACTGTTGGAAATGACAAAGCTGTTGGATGGAACTCAAATAGCGGCGTTTATAATGCGACTATTAGTGGAGCGTCAACATTGATTCTTCACTTTAATATGAATGCGGGGAGTTGCCCGGCGGTTCAGTTCCGTGTGAATTATAAGAACGGCGGTATTTATTATCGTTCAGCGCGAGATGGTTATGGATTTGAGGCTGACTGGTCAGAGTTTTATACCACAACACGCAAGCCATCAGCAGGAGATGTTGGTGCATATACCAAAGCCGAATCAGATTCTCGCTATGTACGAGATATTCGCCTGGGCACACGTGTTGTTCAGACTATGCAAAAAGGCGTGATGTATGAGAAATCAGGTCATGCAATTACGGGGCTTGGCATTGTCGGTGAAGTTGATGGCGATGATCCGGCAGTATTCAGACCAATACAAAAGTTAATTAACGGAACATGGTATAACGTATCGCAGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d40b029f25e294ebd78a26602289f746314dbc7df07af9e8305749cb9348c446
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7630
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50