Protein

View in Explore
Genbank accession
QIG67362.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAVILPSTYTDGTAVCTNGSPNVVGTGTMWLNTILPGDFFWTPSGESVRILTVVDDTHITLAYNWPGATQATGPYEIRFQSDQGRVQETTRQLLERMQSGNLYAFAGLNGLTDTVPYFTGPGAMGLLTREELTNGVNYDVQVDTLPDRDAYDTQATGFTVLVSDTGDGRAAVYFKNSVTTGDWSAPAYVTGPRGLRWRGEWSNATAYDEDDAVSYNGASYIALVGNTNVTPVAGATWGSLAARGATGLTGMTPRGTYSAATAYVATDAVLYNGSTYVAIAPTTGNAPPTPPTTSNAWWQLLALKGTDGTGTGDVVGPAGVTDGSAAMFNGVTGKLIKAATPSEFRTWLGQTAATVSFNNSVANLPGAPTTTQAAIESLAANSGGKNDSIFALEIADLKGQRAGMNGGIADAFDDTSGVNLSSGGIDVNTLLMLHCDGLNNSTSFPDSSSNNRTVTAVADAKVSTSQSVFGGASAVLDGTGDYLSIPDSDDFAFGTGNFTIDLRVRVTANSVGGMFCSHENPGTPLNCYRFYVAATGAVYFQLYSANTLVFSMNSATGLIALNTWYHVALVRNGNVFTIYINGVSVATTTNTASIPNYTGPLKFGMGPTSNNQFLNGFLDEIRVSNVARWTANFTPPATAYYTDTSSSQNYIYDATNDWFIPTGSTITSAVPSAATITQSSTYTIADRALVIPNNTTVVSVGIYADNAGTQVFKILRRVSSTTYDVLVSYSFSHPGGGWYDYVLPTPYLTPATGTLVPATVQLNAVAVNMYDTSARGFHTGDVAVANGVTGWLENGTAVSIMRLSYLVDNMTLISTVYPAASVPTSARIALQLADSVTLVPNTDFSAEVSRDGGTTWTVVTLALTMNFNGLKVYEGTVSLTGQPSGSNMQWRVKSLTNKIVIASGVVLQQS
Physico‐chemical
properties
protein length:910 AA
molecular weight: 95597,08650 Da
isoelectric point:4,58187
aromaticity:0,09670
hydropathy:0,00396

Domains

Domains [InterPro]
DC_1331
STR
1–351
DC_1331 DC_2085 DC_2089
IPR003610
CBM
198–240
IPR003610 G3DSA:2.10.10.20 G3DSA:2.60.120.200
G3DSA:2.10.10.20
ATT
199–240
G3DSA:2.10.10.20 IPR003610 IPR013320
PF13385
LEC
477–628
PF13385
QIG67362.1
1 910
Architecture
STR
ATT
STR
ATT
STR
STR
RBD
STR 1-198 | ATT 199-240 | STR 241-250 | ATT 251-303 | STR 304-351 | STR 398-635 | RBD 636-910
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_TM3_3_9
[NCBI] 		2509558 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG67362.1 [NCBI]
Genbank nucleotide accession
MN988470.1 [NCBI]
CDS location
range 18308 -> 21040
strand -
CDS
ATGGCTGTCATTCTTCCATCGACCTACACGGACGGCACCGCCGTTTGCACGAACGGTTCGCCGAACGTTGTCGGTACGGGCACGATGTGGTTGAACACGATTCTGCCGGGCGATTTCTTCTGGACGCCTTCGGGCGAGTCCGTGCGTATTCTGACGGTCGTCGACGATACCCATATTACGCTCGCTTACAATTGGCCGGGCGCGACACAGGCAACCGGGCCGTATGAAATCCGGTTCCAGTCCGATCAGGGGCGCGTTCAGGAGACGACCCGTCAGCTTCTTGAACGGATGCAGTCGGGCAACCTGTACGCCTTCGCCGGCCTGAACGGGCTGACGGATACTGTTCCGTATTTCACCGGGCCGGGCGCGATGGGTCTCCTGACCCGCGAAGAACTGACGAACGGCGTCAATTACGATGTGCAGGTTGACACGCTACCTGATCGCGATGCGTACGACACACAGGCGACCGGCTTCACCGTTCTTGTCTCCGACACGGGCGACGGCCGGGCGGCTGTGTATTTCAAAAACTCGGTAACTACCGGCGACTGGTCGGCACCGGCCTACGTTACGGGTCCGCGCGGGCTCCGCTGGCGTGGTGAGTGGTCGAACGCTACTGCATACGACGAAGACGACGCAGTTTCGTATAACGGCGCGTCTTATATCGCGCTGGTCGGCAATACCAACGTGACGCCCGTCGCCGGCGCGACGTGGGGTTCGCTCGCCGCGCGTGGCGCAACCGGTCTGACCGGAATGACACCGCGCGGCACCTATTCGGCCGCGACCGCATATGTCGCCACGGACGCGGTATTATATAACGGTTCGACATATGTCGCGATCGCACCGACGACCGGCAACGCACCGCCGACGCCGCCGACAACGTCTAATGCGTGGTGGCAATTGCTCGCACTGAAGGGCACGGACGGCACCGGCACGGGTGACGTAGTTGGTCCGGCCGGGGTCACGGACGGCAGCGCTGCAATGTTCAACGGCGTCACCGGCAAACTGATCAAGGCCGCGACGCCTTCTGAATTCCGGACGTGGCTTGGTCAAACCGCCGCGACCGTCTCGTTCAATAACTCGGTTGCGAACCTTCCTGGCGCGCCGACGACCACACAAGCCGCGATCGAGTCCCTTGCTGCGAACAGCGGCGGTAAGAATGATTCGATCTTCGCGCTTGAAATTGCCGATCTGAAGGGGCAACGCGCGGGCATGAACGGCGGCATTGCTGACGCGTTCGACGACACGTCCGGCGTGAACCTTAGTTCGGGCGGTATCGACGTAAACACCTTGCTCATGTTGCACTGCGACGGCCTGAACAACTCGACATCGTTCCCCGATTCGTCCAGTAACAACCGCACCGTGACCGCCGTCGCCGACGCAAAGGTTAGTACCTCACAATCTGTTTTTGGTGGCGCATCGGCCGTGCTGGACGGCACGGGTGATTATCTTTCGATCCCGGATTCGGATGACTTCGCGTTCGGCACCGGGAATTTCACGATTGATTTGCGCGTCAGGGTAACGGCGAATTCCGTAGGCGGAATGTTCTGTTCTCATGAGAATCCGGGAACACCGTTGAACTGCTATCGTTTTTACGTTGCGGCGACAGGTGCGGTTTATTTTCAGCTTTATTCAGCGAATACTCTCGTTTTCAGCATGAACAGTGCAACAGGACTGATCGCGCTGAATACATGGTATCACGTGGCGCTTGTCAGGAACGGCAACGTTTTCACAATTTATATCAACGGTGTTTCGGTCGCAACTACCACGAATACGGCATCGATTCCGAACTATACGGGTCCGCTGAAATTCGGCATGGGTCCGACCAGTAACAACCAGTTCCTTAACGGGTTCTTAGATGAAATCCGTGTCTCTAACGTTGCCCGCTGGACTGCGAATTTCACGCCGCCGGCAACCGCATATTACACTGACACCAGTTCGTCGCAGAACTATATTTACGATGCAACGAACGATTGGTTTATCCCGACCGGCTCCACGATCACGTCAGCGGTTCCGAGTGCCGCCACTATCACGCAATCCTCTACTTACACGATCGCCGATAGGGCGCTGGTGATCCCGAATAACACAACCGTTGTTTCGGTCGGCATCTATGCGGACAATGCCGGTACGCAAGTGTTCAAGATTTTGCGACGTGTATCAAGTACCACCTATGACGTCTTGGTGTCATATTCATTCAGCCACCCCGGCGGCGGATGGTACGATTACGTACTACCTACTCCGTACCTAACCCCGGCAACCGGTACACTAGTGCCGGCAACCGTCCAGTTGAACGCCGTCGCTGTGAACATGTACGACACTAGCGCACGCGGTTTCCACACAGGGGACGTAGCAGTCGCAAACGGTGTCACCGGATGGCTTGAAAACGGCACCGCCGTTAGCATCATGCGCTTGTCATATCTTGTTGACAACATGACGCTGATTTCTACGGTCTATCCCGCCGCGTCGGTTCCGACATCGGCCCGCATTGCCCTGCAACTCGCCGACTCCGTGACGTTGGTTCCAAACACGGACTTCAGCGCCGAAGTGTCGCGGGACGGCGGCACGACATGGACGGTGGTAACGCTTGCGTTGACGATGAACTTCAACGGCCTGAAGGTCTACGAAGGAACGGTTAGTCTGACCGGTCAGCCTTCCGGCTCCAATATGCAATGGCGCGTGAAGTCGCTGACGAATAAAATCGTCATCGCTTCCGGCGTTGTCCTGCAACAATCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d7f5828f8561ae9ccd488436c99da25effb0508baa641b573f89e11b114e15d9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8214
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank