Protein

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Genbank accession
QPZ53668.1 [GenBank]
Protein name
putative tail fiber
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MTVSTTIIKNSHNGNGSTTTFAYNFKIFADSDLVVIIRSSTGTETTKTLTTHYTVTGAGSASGGTVVFTSGNIPASGETVVIRRNVPQTQVIDYIANDPFPAETHEEGLDRNTMIAQQVSEATDRSIKLSRTNTMTSTEFTVGATDRANKVLSFDSSGELAVTQELGTFRGNWSASTAYQVRDLVKDTSTNNIFMANTAHTSSGTQPLTTNTDSAKWDLIVDAASATSSASAAASSATAAASSATAAATSATNAANSATSASTSATTATTKASEASTSASNAATSESNASTSETNAASSATAAASSATSAASSATTATTQASAASTSATNAATSETNAATSATSASSSATTATTKATEAATSATNAATSATSADTAKTAAQAAQAAAEAAADNFDDTYLGAKASDPTVDNDGDALTAGDLYFNTTNNVLRVYNGSSWQDAAVDASSLASNGFAIAMAIAL
Physico‐chemical
properties
protein length:460 AA
molecular weight: 45841,45870 Da
isoelectric point:4,46620
aromaticity:0,04783
hydropathy:-0,18457

Domains

Domains [InterPro]
DC_0055
ATT
8–135
DC_0055 DC_2093 DC_2093 PR00833
PR00833
Unmapped
243–260
PR00833 PR00833 DC_2093
QPZ53668.1
1 460
Architecture
ATT
STR
STR
ATT 8-135 | STR 149-276 | STR 301-459 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC203P
[NCBI] 		2796523 No lineage information
Host Candidatus Pelagibacter sp. FZCC0015
[NCBI] 		2268451 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPZ53668.1 [NCBI]
Genbank nucleotide accession
MW273925 [NCBI]
CDS location
range 15740 -> 17122
strand -
CDS
ATGACAGTATCAACTACAATTATAAAGAACTCTCACAATGGAAATGGTAGTACAACTACCTTTGCTTACAATTTTAAAATTTTTGCGGACAGCGACTTAGTAGTAATTATTAGATCATCTACAGGAACTGAGACAACTAAAACATTAACCACTCATTATACAGTTACAGGTGCAGGATCTGCTTCTGGTGGAACTGTTGTTTTTACGAGTGGTAACATACCCGCTTCGGGTGAGACAGTTGTTATAAGAAGGAATGTCCCGCAAACTCAAGTGATAGATTATATCGCTAATGATCCATTCCCTGCGGAGACCCATGAAGAGGGTCTGGATCGTAACACTATGATTGCTCAACAAGTATCAGAAGCAACAGACAGATCCATCAAACTATCAAGAACAAATACTATGACATCTACAGAATTTACTGTAGGTGCAACAGATAGAGCTAACAAAGTTTTATCTTTTGATTCATCTGGAGAACTAGCAGTAACACAAGAATTAGGAACATTTAGAGGTAACTGGTCTGCATCAACTGCGTATCAAGTTAGAGATTTAGTTAAAGATACTTCGACTAACAATATCTTTATGGCTAACACAGCTCATACTTCTTCTGGTACACAACCACTTACAACAAATACAGATTCAGCTAAATGGGATTTAATAGTAGACGCAGCTTCTGCAACTTCATCTGCTTCTGCCGCTGCTTCAAGTGCTACAGCCGCAGCTAGTAGTGCAACTGCAGCCGCAACATCAGCAACTAACGCAGCCAACTCTGCAACTTCAGCATCTACTTCTGCAACAACCGCAACTACAAAAGCGAGTGAAGCATCAACGTCAGCATCTAATGCTGCTACTTCAGAATCTAATGCTTCGACTTCAGAAACAAATGCTGCATCATCAGCAACAGCCGCTGCAAGTTCAGCAACTTCTGCTGCATCATCAGCTACAACAGCGACTACACAAGCTAGTGCTGCAAGTACGTCTGCTACAAATGCGGCAACATCTGAAACTAATGCTGCAACGTCTGCTACGAGTGCTTCATCTAGTGCAACAACAGCTACAACGAAAGCAACAGAAGCTGCCACTTCAGCAACTAATGCAGCAACAAGTGCTACCTCTGCTGACACAGCTAAAACTGCTGCTCAAGCAGCTCAAGCCGCTGCCGAAGCCGCAGCTGATAATTTTGATGATACTTATTTAGGTGCAAAAGCTAGTGATCCTACAGTAGACAATGATGGTGATGCACTAACTGCCGGGGACCTCTATTTTAATACAACGAATAATGTACTTCGTGTCTATAATGGATCATCTTGGCAAGATGCTGCAGTAGACGCATCAAGTTTAGCAAGTAATGGATTTGCTATTGCAATGGCGATAGCATTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c79e0c5fa4b60be1e63ca19e9a71c51705353ec4c98d490ff73e3909e9105ba3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8899
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic diversity, life strategies and ecology of marine HTVC010P-type pelagiphages Du,S., Qin,F., Zhang,Z. and Zhao,Y. — — GenBank