Protein

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Genbank accession
UPW38683.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MAANTPEQHVQAVYKAEQDINSTKNTNNSASTVKGENGFCILASIYNSASDQYIQNYQAIVFDAVPNIGVKRQADVTSYPVENGANVSDHVQVKNNTFSLSGMITETPVRLMRDMLYSAGVNGTRISQAITYLDKIFDERQPIILITEHKVYENVILKGISYEYQTEYAMQFDLEFEQVRLVSYGETNAIALKTQPNKNTGVKNKKGTSPDADLDARTGKATGTEHLSDHSADGKK
Physico‐chemical
properties
protein length:236 AA
molecular weight: 26082,73200 Da
isoelectric point:5,56439
aromaticity:0,07627
hydropathy:-0,52839

Domains

Domains [InterPro]
DC_0628
STR
42–236
DC_0628
IPR048494
ATT
62–187
IPR048494
UPW38683.1
1 236
Architecture
STR
ATT
STR
STR 42-61 | ATT 62-187 | STR 188-236
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_ESCO32
[NCBI] 		2918867 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPW38683.1 [NCBI]
Genbank nucleotide accession
OM386658.1 [NCBI]
CDS location
range 139154 -> 139864
strand -
CDS
ATGGCAGCAAACACTCCAGAACAACACGTTCAAGCGGTTTATAAAGCGGAACAAGATATAAATTCTACAAAAAACACAAATAACTCTGCCTCTACTGTGAAAGGGGAGAATGGTTTTTGTATTTTAGCAAGTATTTACAATAGTGCAAGTGATCAATATATTCAAAACTACCAAGCTATAGTTTTTGATGCTGTTCCAAATATCGGTGTAAAACGTCAAGCAGATGTTACTAGCTATCCTGTAGAAAATGGTGCTAATGTATCGGATCACGTTCAAGTTAAAAATAATACTTTCTCTTTATCAGGAATGATTACAGAGACACCTGTAAGATTGATGCGAGATATGTTATATAGTGCGGGTGTTAACGGTACTCGTATTAGTCAAGCAATTACTTACCTAGATAAAATATTTGATGAAAGACAGCCTATCATTTTAATAACAGAACATAAGGTGTATGAGAATGTTATTTTGAAAGGCATATCATATGAATATCAAACAGAATATGCAATGCAATTTGACTTGGAATTTGAACAAGTAAGATTAGTTTCTTACGGGGAAACAAATGCTATTGCGCTTAAGACACAACCAAATAAGAATACAGGTGTTAAGAACAAGAAAGGTACTAGTCCAGATGCTGATCTTGATGCAAGAACAGGGAAAGCAACTGGTACAGAACATCTTAGTGATCACAGTGCAGATGGTAAAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
73cb67de21f4d8971ff98121fe902a44547d15f7dbc295b5b4773c5dfa5456e1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7255
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Avian Pathogenic Escherichia coli bacteriophages Nicolas,M., Trotereau,A. and Schouler,C. 2015-06 — GenBank