Protein

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Genbank accession
XOD43148.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
Protein sequence
MNETFTYEGTDPYMWESSGPIWRSSEDGVLFVAKTDGSNSRAFLRKDAEFPAGHWIVYLRIRTQNGLPGQNRCAQIRLMEEDNKECSLYFNLGTDNVPTPGVITMQYGYEGASDRTVASMFSPVNTELWMDLAIKYDAVNRHVELFRRLPNSTWEKGEGRLMVDALKPVAIEVSSFPVSPKDWWLHLDYISVCKPNLICYGDSIAAGQNEYGVTRGTEDYHSHRNWAGTWFAKAPLYATNRNNLVLVQGVEGRRTWQYLSHLSEISGSGVKVVFLHASTNDVYEPSMTQSKRTSDTQAIVDQLHAVGAQVVLFNSMQGTKAYNDASTGAVKLRDYTDTWWSTELPKVTGLAQTLDIARLLAKDGYMDPVLAADDGLHLTDAAAQKIAAKLGQFFSNSSDTNGFAPLDSPTFTGIPTVPTQTPLLPFGKTIANTEYVVTFLQDWTSRYGYGELSMASHTGAQLSGSGVRSGYYHVPAGSGNPLPGDLSSALAFVDHKSYDTNKGWQLWNPAYSGRLFIRTTNASGVWQTPVELATFTWLDANNVTKPRTLKFMELPVFNPTGSPTLSGFVPIQDSADGGWRNLSATPTGVALLGAASAGGALNYIGGMPIANQTLPDNNIDNAASNGFQRVPNGTSGLPLNIGDINGHSAITAVFDASIKYQLLFPRTTGVESYSNSVFYRARLDNGWESWVRLLASNQLEGNVTNDLLTSAVFQSNGNNSLNVGRSVRLANGTQIVSATVRLIFASEGILNYMYTYPMGFIEPPAVIVQPIEGLGADINGMPISAVMGPFTYNVANGNVLIQCFRVVGYTDTAFTSNSFINCSLVAIGRWK
Physico‐chemical
properties
protein length:831 AA
molecular weight: 90707,74800 Da
isoelectric point:5,54819
aromaticity:0,10590
hydropathy:-0,18748

Domains

Domains [InterPro]
DC_0711
STR
130–829
DC_0711
IPR036514
STR
188–399
IPR036514
SSF52266
STR
194–392
SSF52266
cd00229
ENZ
197–393
cd00229
IPR013830
ENZ
199–384
IPR013830
XOD43148.1
1 831
Architecture
STR
STR 130-829 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XOD43148.1
1 831
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0468
Central domain 11 243 234 0,6317
C-terminal 244 831 587 0,6695
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-243
C-terminal
244-831

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage HHBS9_2
[NCBI] 		3390398 Viruses >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOD43148.1 [NCBI]
Genbank nucleotide accession
PQ287654.1 [NCBI]
CDS location
range 37668 -> 40163
strand +
CDS
ATGAACGAAACCTTCACCTACGAGGGTACTGATCCCTACATGTGGGAATCCTCTGGTCCCATCTGGCGATCCTCTGAGGATGGCGTTCTCTTTGTGGCCAAAACTGATGGGAGCAATTCTCGGGCTTTCCTGCGTAAAGATGCTGAATTCCCCGCTGGTCATTGGATCGTCTACTTGCGTATCCGTACGCAGAACGGCCTGCCGGGCCAGAACCGGTGTGCTCAAATCCGTCTCATGGAAGAAGACAACAAAGAGTGCTCTCTCTACTTCAACCTCGGTACGGATAACGTTCCTACTCCGGGTGTGATCACCATGCAGTATGGCTATGAAGGTGCCAGTGACCGCACTGTAGCCAGCATGTTCTCTCCGGTGAACACTGAGCTTTGGATGGATCTGGCCATCAAGTACGATGCAGTCAACCGTCATGTTGAACTCTTCCGTCGCCTTCCCAATTCCACCTGGGAAAAAGGCGAAGGTCGTCTCATGGTGGATGCTCTCAAGCCTGTGGCTATCGAAGTATCCTCGTTCCCCGTTTCGCCAAAAGACTGGTGGCTGCACCTTGACTACATCTCGGTGTGTAAGCCGAACCTTATCTGCTACGGCGACAGCATCGCTGCTGGTCAGAACGAGTACGGTGTTACTCGTGGTACTGAGGACTACCACAGCCACCGCAACTGGGCTGGTACTTGGTTCGCCAAGGCTCCGTTGTACGCTACGAACCGGAACAACTTGGTTCTGGTACAGGGTGTGGAAGGCCGTCGTACCTGGCAATACCTGAGCCATCTGAGTGAGATCAGTGGTTCCGGCGTCAAGGTGGTCTTCCTGCATGCCAGCACGAATGACGTGTATGAACCCTCTATGACCCAGTCCAAGCGGACCTCGGATACCCAAGCCATCGTAGACCAGCTTCATGCTGTCGGTGCCCAGGTAGTCCTGTTCAACTCCATGCAGGGAACCAAGGCGTACAACGATGCCTCGACTGGTGCGGTCAAGCTTCGTGACTACACCGATACATGGTGGAGCACTGAGCTTCCCAAGGTCACTGGTTTGGCTCAGACTCTGGACATCGCACGCCTTCTCGCCAAGGACGGGTATATGGACCCCGTCCTTGCTGCTGATGATGGCTTGCACCTGACGGATGCCGCTGCTCAGAAGATCGCTGCCAAGTTGGGTCAGTTCTTCTCCAACTCCAGTGATACCAATGGTTTCGCTCCGTTGGATAGCCCTACCTTCACTGGCATTCCGACCGTTCCGACGCAGACTCCACTCCTGCCGTTCGGCAAGACCATTGCCAACACCGAGTACGTGGTCACTTTCCTCCAGGATTGGACCAGCCGGTATGGCTATGGCGAACTGTCTATGGCTAGCCATACTGGTGCTCAGCTGTCCGGTTCCGGTGTCCGCAGCGGCTACTACCATGTACCTGCTGGTTCGGGTAACCCTCTCCCAGGCGATCTGAGCAGTGCTCTGGCTTTCGTAGACCACAAGTCTTATGACACCAACAAGGGATGGCAGCTGTGGAATCCGGCCTACTCTGGCCGACTGTTCATCCGTACGACGAATGCTTCTGGTGTCTGGCAGACTCCGGTAGAACTGGCCACCTTCACTTGGTTGGATGCGAACAACGTCACCAAGCCACGAACCCTGAAGTTCATGGAACTGCCGGTGTTCAATCCTACTGGTAGCCCCACTCTGTCTGGCTTCGTACCGATCCAGGACAGTGCGGATGGTGGCTGGCGTAACCTCTCTGCCACTCCTACTGGTGTGGCTCTGCTGGGTGCAGCTTCGGCAGGTGGAGCACTCAACTACATCGGTGGTATGCCCATCGCAAACCAGACTCTGCCCGACAACAACATCGATAACGCAGCCAGCAATGGCTTCCAAAGGGTTCCCAATGGAACCTCTGGGTTGCCTTTGAACATAGGCGACATCAATGGACACTCCGCCATTACTGCGGTGTTCGATGCCTCCATTAAGTACCAGCTGCTGTTCCCCCGCACTACTGGAGTAGAGTCTTACTCCAATTCTGTGTTCTATCGCGCACGGTTGGACAATGGATGGGAAAGTTGGGTTCGTCTTCTCGCCTCCAACCAGCTGGAAGGTAACGTAACCAACGACCTGCTCACCTCTGCTGTATTCCAGAGCAACGGTAACAACAGCCTCAACGTAGGTCGGTCTGTACGTTTGGCCAATGGTACTCAGATCGTCTCTGCTACCGTTCGGCTTATCTTTGCCTCTGAAGGTATTCTGAACTACATGTACACCTATCCTATGGGCTTTATCGAGCCGCCCGCTGTGATCGTGCAGCCCATTGAAGGTCTAGGAGCAGATATCAATGGAATGCCCATCTCTGCGGTTATGGGACCGTTCACGTATAACGTGGCGAATGGGAACGTTTTGATACAGTGCTTCCGCGTTGTTGGTTATACTGACACTGCTTTTACCAGCAACTCCTTCATCAACTGCTCTTTAGTAGCAATAGGACGGTGGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0940c3c6365a38edc682bc625af0a6a14ab3b12bbe82b692d21bf6e2c239ce9d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6883
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50