Protein

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Genbank accession
XGU08416.1 [GenBank]
Protein name
receptor binding tail protein
RBP type
TSP
Evidence DepoScope
Probability 0,98
Protein sequence
MSFFAGKYTDGKTVLSLNRASGGDINVHYSPNTNSIFHSDMPHMFVKRRFQVGLGNAGNGYFTGALPSDLSYLLANRANVILPVLVVRDNADGTEYYHQMTGIQRNSTYRWRNLYESISIWGQYTGSIQFDLNLEWGYWKQGGAVWDQIGNYGTGGHTIFDHEGGEDYVADAYYDLAGGWIMYQWRDPQDWYMYTNWIPRAQSRPIMNYEDSQNLVNPDYMHPLGPSSSVYDAVYVRAGGARCATGMGDPNAYGNTAYTKVRNLDFPYQIPMANSSSAYLTAGAERHVANARMSGFSEVYYPFTPVRMEYLWLNVTFDNYWGYSAENLFTGNDIKIAKDSFIIKGVDLRNTNYEMLAAVSTGTPSISNTYFSSNVFAWSSTEMDDGGAFRFFGANAWGGLKGFTGSNTGSTVGNSTPWNIGLYRLPQNSNIEINSPQNKIAINGVDIWSPNVRPLHLFTQNKANNIILGDNGRLYPMAYGETRLINTVDVGLGGSPEPSTILLSIEWMGNSLCDTDGDVNMQRIGNNAGSGAGIGPYVGAARRLTKYDYDAGDGVSHQIVVLHTNTFVPILTTNTISYAGGAAGAPRNKFQYYIRKNASNILEFWVTSRALPMSGLPVSYTPWVQYHKLRLNIQRLT
Physico‐chemical
properties
protein length:637 AA
molecular weight: 70794,14630 Da
isoelectric point:6,18769
aromaticity:0,13344
hydropathy:-0,34710

Domains

Domains [InterPro]
IPR059609
RBD
1–637
IPR059609
XGU08416.1
1 637
Architecture
RBD
RBD 1-637
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XGU08416.1
1 637
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0113
Central domain 11 453 444 0,8910
C-terminal 454 637 183 0,9293
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-453
C-terminal
454-637

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_Sen_SG_WM_RUS_R2
[NCBI] 		3234146 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XGU08416.1 [NCBI]
Genbank nucleotide accession
PQ002169 [NCBI]
CDS location
range 22728 -> 24641
strand -
CDS
ATGAGCTTCTTCGCAGGAAAATATACAGATGGAAAAACAGTCCTATCTTTAAATAGGGCTAGTGGAGGAGACATCAACGTTCATTACAGTCCCAACACAAACTCCATCTTCCATTCAGACATGCCTCACATGTTTGTTAAACGCCGTTTTCAGGTGGGTTTAGGGAACGCAGGTAATGGATACTTTACCGGAGCCTTACCATCCGACCTCAGCTATCTTCTAGCAAATAGGGCAAATGTGATTCTTCCAGTCCTAGTGGTACGAGATAATGCTGATGGTACAGAATATTACCACCAGATGACAGGTATTCAGAGGAACAGTACGTATAGATGGCGTAACCTTTATGAGAGTATTAGTATCTGGGGTCAATATACCGGATCTATTCAGTTTGACTTGAACCTTGAATGGGGGTACTGGAAACAGGGTGGTGCTGTCTGGGATCAGATTGGTAACTATGGTACTGGTGGGCATACTATATTTGACCATGAAGGTGGTGAAGACTACGTTGCTGATGCCTATTATGATTTAGCGGGTGGTTGGATTATGTACCAATGGCGTGATCCACAGGACTGGTATATGTATACTAACTGGATACCACGTGCTCAAAGCCGTCCTATCATGAACTATGAAGACAGTCAGAACCTGGTAAATCCTGATTACATGCATCCACTTGGACCTTCTAGCAGTGTTTACGATGCTGTGTATGTTAGAGCAGGTGGTGCTAGATGTGCTACTGGTATGGGTGATCCTAATGCCTATGGTAATACAGCTTATACTAAGGTTCGTAACCTGGATTTCCCTTATCAGATTCCAATGGCTAACTCTAGTTCCGCTTATCTAACTGCTGGTGCTGAACGTCATGTGGCTAATGCGCGTATGTCTGGATTCAGTGAGGTTTACTACCCATTCACCCCAGTTCGTATGGAGTACCTATGGTTAAACGTTACGTTTGATAACTACTGGGGTTACTCAGCTGAAAACCTGTTTACTGGTAATGACATTAAGATTGCAAAAGATTCCTTCATAATTAAAGGAGTTGATCTAAGAAATACCAACTACGAAATGTTAGCAGCTGTGAGTACCGGTACTCCTAGCATTAGTAATACTTACTTCTCTAGTAACGTGTTTGCTTGGTCCTCTACAGAGATGGATGATGGTGGTGCTTTCAGATTCTTTGGTGCTAATGCCTGGGGCGGTTTGAAAGGATTTACTGGAAGTAACACAGGTAGTACAGTGGGTAACTCAACACCATGGAATATCGGATTGTACAGACTTCCACAAAATAGTAATATCGAGATTAACTCCCCACAGAATAAGATAGCTATTAACGGTGTGGATATCTGGAGTCCCAATGTAAGACCTCTACATTTATTTACGCAGAATAAAGCCAACAATATTATTCTTGGAGATAATGGTAGGCTGTATCCTATGGCATATGGTGAAACCAGATTAATAAACACAGTTGATGTTGGTTTAGGTGGTAGTCCAGAACCTTCCACGATTCTCCTAAGTATTGAATGGATGGGTAACTCTCTATGTGATACTGATGGTGACGTAAACATGCAGCGTATTGGTAACAATGCTGGTAGCGGTGCAGGTATTGGTCCATACGTGGGGGCTGCCAGACGTTTGACTAAGTATGACTATGACGCTGGTGATGGTGTTTCTCACCAAATTGTAGTATTACATACAAATACTTTTGTACCTATTCTAACTACTAATACTATCTCGTATGCTGGAGGTGCTGCTGGTGCTCCTCGAAACAAATTCCAATACTATATCAGAAAGAACGCCTCCAATATCCTAGAATTCTGGGTAACTTCTAGGGCATTGCCAATGAGCGGTCTGCCTGTTTCATATACTCCGTGGGTTCAATACCACAAACTAAGACTTAATATTCAGAGGTTAACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d08aeb266f54ec844239bdd1fcbbae66c73e01bd3057c7a6678edcba15f1f4d3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2453
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50